Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31035 | 93328;93329;93330 | chr2:178548523;178548522;178548521 | chr2:179413250;179413249;179413248 |
N2AB | 29394 | 88405;88406;88407 | chr2:178548523;178548522;178548521 | chr2:179413250;179413249;179413248 |
N2A | 28467 | 85624;85625;85626 | chr2:178548523;178548522;178548521 | chr2:179413250;179413249;179413248 |
N2B | 21970 | 66133;66134;66135 | chr2:178548523;178548522;178548521 | chr2:179413250;179413249;179413248 |
Novex-1 | 22095 | 66508;66509;66510 | chr2:178548523;178548522;178548521 | chr2:179413250;179413249;179413248 |
Novex-2 | 22162 | 66709;66710;66711 | chr2:178548523;178548522;178548521 | chr2:179413250;179413249;179413248 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs760377288 | None | 0.911 | N | 0.575 | 0.265 | 0.235038932564 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
L/V | rs760377288 | None | 0.911 | N | 0.575 | 0.265 | 0.235038932564 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9097 | likely_pathogenic | 0.8504 | pathogenic | -2.338 | Highly Destabilizing | 0.964 | D | 0.711 | prob.delet. | None | None | None | None | N |
L/C | 0.8926 | likely_pathogenic | 0.8382 | pathogenic | -1.386 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9993 | pathogenic | -3.091 | Highly Destabilizing | 0.998 | D | 0.868 | deleterious | None | None | None | None | N |
L/E | 0.9979 | likely_pathogenic | 0.9943 | pathogenic | -2.759 | Highly Destabilizing | 0.998 | D | 0.852 | deleterious | None | None | None | None | N |
L/F | 0.475 | ambiguous | 0.3623 | ambiguous | -1.434 | Destabilizing | 0.994 | D | 0.707 | prob.neutral | D | 0.542612441 | None | None | N |
L/G | 0.9925 | likely_pathogenic | 0.9828 | pathogenic | -2.941 | Highly Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
L/H | 0.9933 | likely_pathogenic | 0.9829 | pathogenic | -2.849 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/I | 0.1066 | likely_benign | 0.093 | benign | -0.516 | Destabilizing | 0.469 | N | 0.343 | neutral | None | None | None | None | N |
L/K | 0.9964 | likely_pathogenic | 0.9905 | pathogenic | -1.753 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
L/M | 0.2311 | likely_benign | 0.1869 | benign | -0.666 | Destabilizing | 0.659 | D | 0.339 | neutral | D | 0.522381819 | None | None | N |
L/N | 0.9981 | likely_pathogenic | 0.9952 | pathogenic | -2.546 | Highly Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
L/P | 0.9961 | likely_pathogenic | 0.9913 | pathogenic | -1.115 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
L/Q | 0.9899 | likely_pathogenic | 0.9744 | pathogenic | -2.111 | Highly Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
L/R | 0.9917 | likely_pathogenic | 0.9798 | pathogenic | -2.043 | Highly Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
L/S | 0.9927 | likely_pathogenic | 0.9822 | pathogenic | -3.007 | Highly Destabilizing | 0.961 | D | 0.773 | deleterious | D | 0.566592499 | None | None | N |
L/T | 0.9642 | likely_pathogenic | 0.928 | pathogenic | -2.502 | Highly Destabilizing | 0.469 | N | 0.595 | neutral | None | None | None | None | N |
L/V | 0.119 | likely_benign | 0.1043 | benign | -1.115 | Destabilizing | 0.911 | D | 0.575 | neutral | N | 0.520351245 | None | None | N |
L/W | 0.9603 | likely_pathogenic | 0.917 | pathogenic | -1.825 | Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.566592499 | None | None | N |
L/Y | 0.9659 | likely_pathogenic | 0.9324 | pathogenic | -1.588 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.