Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31038 | 93337;93338;93339 | chr2:178548514;178548513;178548512 | chr2:179413241;179413240;179413239 |
N2AB | 29397 | 88414;88415;88416 | chr2:178548514;178548513;178548512 | chr2:179413241;179413240;179413239 |
N2A | 28470 | 85633;85634;85635 | chr2:178548514;178548513;178548512 | chr2:179413241;179413240;179413239 |
N2B | 21973 | 66142;66143;66144 | chr2:178548514;178548513;178548512 | chr2:179413241;179413240;179413239 |
Novex-1 | 22098 | 66517;66518;66519 | chr2:178548514;178548513;178548512 | chr2:179413241;179413240;179413239 |
Novex-2 | 22165 | 66718;66719;66720 | chr2:178548514;178548513;178548512 | chr2:179413241;179413240;179413239 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 1.0 | N | 0.666 | 0.368 | 0.340273420219 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4968 | ambiguous | 0.3631 | ambiguous | -0.336 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.499106394 | None | None | I |
D/C | 0.9169 | likely_pathogenic | 0.8552 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
D/E | 0.258 | likely_benign | 0.1928 | benign | -0.406 | Destabilizing | 1.0 | D | 0.471 | neutral | N | 0.412639416 | None | None | I |
D/F | 0.8968 | likely_pathogenic | 0.8436 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
D/G | 0.4924 | ambiguous | 0.3497 | ambiguous | -0.601 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.475434163 | None | None | I |
D/H | 0.6778 | likely_pathogenic | 0.533 | ambiguous | -0.052 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.4968301 | None | None | I |
D/I | 0.8094 | likely_pathogenic | 0.7057 | pathogenic | 0.335 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
D/K | 0.7974 | likely_pathogenic | 0.6734 | pathogenic | -0.073 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
D/L | 0.7725 | likely_pathogenic | 0.6601 | pathogenic | 0.335 | Stabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
D/M | 0.8686 | likely_pathogenic | 0.7988 | pathogenic | 0.465 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
D/N | 0.2698 | likely_benign | 0.2035 | benign | -0.4 | Destabilizing | 1.0 | D | 0.666 | neutral | N | 0.489966836 | None | None | I |
D/P | 0.9555 | likely_pathogenic | 0.9215 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
D/Q | 0.678 | likely_pathogenic | 0.5301 | ambiguous | -0.31 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
D/R | 0.8172 | likely_pathogenic | 0.7054 | pathogenic | 0.185 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
D/S | 0.3888 | ambiguous | 0.2812 | benign | -0.564 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | I |
D/T | 0.6138 | likely_pathogenic | 0.4771 | ambiguous | -0.355 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
D/V | 0.6045 | likely_pathogenic | 0.473 | ambiguous | 0.136 | Stabilizing | 1.0 | D | 0.854 | deleterious | N | 0.472547327 | None | None | I |
D/W | 0.9678 | likely_pathogenic | 0.951 | pathogenic | 0.101 | Stabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
D/Y | 0.5447 | ambiguous | 0.4393 | ambiguous | 0.172 | Stabilizing | 1.0 | D | 0.844 | deleterious | N | 0.477333493 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.