Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31048 | 93367;93368;93369 | chr2:178548484;178548483;178548482 | chr2:179413211;179413210;179413209 |
N2AB | 29407 | 88444;88445;88446 | chr2:178548484;178548483;178548482 | chr2:179413211;179413210;179413209 |
N2A | 28480 | 85663;85664;85665 | chr2:178548484;178548483;178548482 | chr2:179413211;179413210;179413209 |
N2B | 21983 | 66172;66173;66174 | chr2:178548484;178548483;178548482 | chr2:179413211;179413210;179413209 |
Novex-1 | 22108 | 66547;66548;66549 | chr2:178548484;178548483;178548482 | chr2:179413211;179413210;179413209 |
Novex-2 | 22175 | 66748;66749;66750 | chr2:178548484;178548483;178548482 | chr2:179413211;179413210;179413209 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.942 | D | 0.745 | 0.426 | 0.463758542814 | gnomAD-4.0.0 | 6.84184E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99449E-07 | 0 | 0 |
I/V | None | None | 0.006 | N | 0.243 | 0.084 | 0.507331908393 | gnomAD-4.0.0 | 6.84184E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99449E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9728 | likely_pathogenic | 0.9664 | pathogenic | -2.462 | Highly Destabilizing | 0.754 | D | 0.691 | prob.neutral | None | None | None | None | I |
I/C | 0.9658 | likely_pathogenic | 0.9576 | pathogenic | -1.263 | Destabilizing | 0.994 | D | 0.733 | prob.delet. | None | None | None | None | I |
I/D | 0.9983 | likely_pathogenic | 0.997 | pathogenic | -2.585 | Highly Destabilizing | 0.993 | D | 0.826 | deleterious | None | None | None | None | I |
I/E | 0.9948 | likely_pathogenic | 0.9921 | pathogenic | -2.499 | Highly Destabilizing | 0.978 | D | 0.823 | deleterious | None | None | None | None | I |
I/F | 0.8708 | likely_pathogenic | 0.8616 | pathogenic | -1.666 | Destabilizing | 0.942 | D | 0.745 | deleterious | D | 0.529145179 | None | None | I |
I/G | 0.9923 | likely_pathogenic | 0.9893 | pathogenic | -2.866 | Highly Destabilizing | 0.978 | D | 0.818 | deleterious | None | None | None | None | I |
I/H | 0.994 | likely_pathogenic | 0.9914 | pathogenic | -2.251 | Highly Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | I |
I/K | 0.9885 | likely_pathogenic | 0.9838 | pathogenic | -1.917 | Destabilizing | 0.978 | D | 0.823 | deleterious | None | None | None | None | I |
I/L | 0.3847 | ambiguous | 0.371 | ambiguous | -1.338 | Destabilizing | 0.294 | N | 0.479 | neutral | N | 0.497531798 | None | None | I |
I/M | 0.5624 | ambiguous | 0.5442 | ambiguous | -0.841 | Destabilizing | 0.942 | D | 0.713 | prob.delet. | D | 0.523944619 | None | None | I |
I/N | 0.9551 | likely_pathogenic | 0.9278 | pathogenic | -1.811 | Destabilizing | 0.99 | D | 0.828 | deleterious | D | 0.559192078 | None | None | I |
I/P | 0.9644 | likely_pathogenic | 0.9427 | pathogenic | -1.691 | Destabilizing | 0.993 | D | 0.833 | deleterious | None | None | None | None | I |
I/Q | 0.9895 | likely_pathogenic | 0.986 | pathogenic | -1.91 | Destabilizing | 0.993 | D | 0.825 | deleterious | None | None | None | None | I |
I/R | 0.9861 | likely_pathogenic | 0.9808 | pathogenic | -1.307 | Destabilizing | 0.978 | D | 0.825 | deleterious | None | None | None | None | I |
I/S | 0.97 | likely_pathogenic | 0.958 | pathogenic | -2.363 | Highly Destabilizing | 0.942 | D | 0.793 | deleterious | D | 0.547075304 | None | None | I |
I/T | 0.9481 | likely_pathogenic | 0.9374 | pathogenic | -2.174 | Highly Destabilizing | 0.822 | D | 0.778 | deleterious | D | 0.526502287 | None | None | I |
I/V | 0.1188 | likely_benign | 0.122 | benign | -1.691 | Destabilizing | 0.006 | N | 0.243 | neutral | N | 0.463265811 | None | None | I |
I/W | 0.9966 | likely_pathogenic | 0.996 | pathogenic | -1.958 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | I |
I/Y | 0.9812 | likely_pathogenic | 0.9761 | pathogenic | -1.77 | Destabilizing | 0.978 | D | 0.77 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.