Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31050 | 93373;93374;93375 | chr2:178548478;178548477;178548476 | chr2:179413205;179413204;179413203 |
N2AB | 29409 | 88450;88451;88452 | chr2:178548478;178548477;178548476 | chr2:179413205;179413204;179413203 |
N2A | 28482 | 85669;85670;85671 | chr2:178548478;178548477;178548476 | chr2:179413205;179413204;179413203 |
N2B | 21985 | 66178;66179;66180 | chr2:178548478;178548477;178548476 | chr2:179413205;179413204;179413203 |
Novex-1 | 22110 | 66553;66554;66555 | chr2:178548478;178548477;178548476 | chr2:179413205;179413204;179413203 |
Novex-2 | 22177 | 66754;66755;66756 | chr2:178548478;178548477;178548476 | chr2:179413205;179413204;179413203 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 1.0 | N | 0.669 | 0.486 | 0.313210971179 | gnomAD-4.0.0 | 3.18226E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71611E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4814 | ambiguous | 0.4732 | ambiguous | -0.951 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | I |
H/C | 0.2441 | likely_benign | 0.2578 | benign | -0.023 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
H/D | 0.3392 | likely_benign | 0.2865 | benign | -0.779 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.464999229 | None | None | I |
H/E | 0.5518 | ambiguous | 0.5242 | ambiguous | -0.651 | Destabilizing | 0.999 | D | 0.517 | neutral | None | None | None | None | I |
H/F | 0.4626 | ambiguous | 0.4735 | ambiguous | 0.509 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
H/G | 0.3115 | likely_benign | 0.2738 | benign | -1.341 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
H/I | 0.8171 | likely_pathogenic | 0.8149 | pathogenic | 0.152 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
H/K | 0.6255 | likely_pathogenic | 0.5863 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
H/L | 0.3979 | ambiguous | 0.3803 | ambiguous | 0.152 | Stabilizing | 1.0 | D | 0.786 | deleterious | N | 0.490207055 | None | None | I |
H/M | 0.7585 | likely_pathogenic | 0.7667 | pathogenic | 0.027 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
H/N | 0.1073 | likely_benign | 0.1009 | benign | -0.774 | Destabilizing | 0.999 | D | 0.507 | neutral | N | 0.396459242 | None | None | I |
H/P | 0.947 | likely_pathogenic | 0.9192 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.508653705 | None | None | I |
H/Q | 0.3398 | likely_benign | 0.3378 | benign | -0.46 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.471342331 | None | None | I |
H/R | 0.2978 | likely_benign | 0.2701 | benign | -1.094 | Destabilizing | 1.0 | D | 0.669 | neutral | N | 0.515246496 | None | None | I |
H/S | 0.2301 | likely_benign | 0.2205 | benign | -0.8 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
H/T | 0.4435 | ambiguous | 0.4463 | ambiguous | -0.57 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | I |
H/V | 0.7291 | likely_pathogenic | 0.7228 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
H/W | 0.65 | likely_pathogenic | 0.6156 | pathogenic | 0.818 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
H/Y | 0.1361 | likely_benign | 0.1331 | benign | 0.847 | Stabilizing | 0.999 | D | 0.539 | neutral | N | 0.506589727 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.