Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31054 | 93385;93386;93387 | chr2:178548466;178548465;178548464 | chr2:179413193;179413192;179413191 |
N2AB | 29413 | 88462;88463;88464 | chr2:178548466;178548465;178548464 | chr2:179413193;179413192;179413191 |
N2A | 28486 | 85681;85682;85683 | chr2:178548466;178548465;178548464 | chr2:179413193;179413192;179413191 |
N2B | 21989 | 66190;66191;66192 | chr2:178548466;178548465;178548464 | chr2:179413193;179413192;179413191 |
Novex-1 | 22114 | 66565;66566;66567 | chr2:178548466;178548465;178548464 | chr2:179413193;179413192;179413191 |
Novex-2 | 22181 | 66766;66767;66768 | chr2:178548466;178548465;178548464 | chr2:179413193;179413192;179413191 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1049541565 | None | 0.896 | N | 0.629 | 0.37 | 0.32053947749 | gnomAD-4.0.0 | 1.59107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5723 | likely_pathogenic | 0.54 | ambiguous | -1.363 | Destabilizing | 0.811 | D | 0.627 | neutral | D | 0.536837272 | None | None | N |
E/C | 0.9625 | likely_pathogenic | 0.9574 | pathogenic | -0.477 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
E/D | 0.6452 | likely_pathogenic | 0.5698 | pathogenic | -1.507 | Destabilizing | 0.011 | N | 0.359 | neutral | D | 0.523311405 | None | None | N |
E/F | 0.972 | likely_pathogenic | 0.965 | pathogenic | -1.049 | Destabilizing | 0.996 | D | 0.808 | deleterious | None | None | None | None | N |
E/G | 0.6807 | likely_pathogenic | 0.5999 | pathogenic | -1.74 | Destabilizing | 0.811 | D | 0.676 | prob.neutral | D | 0.538611699 | None | None | N |
E/H | 0.8934 | likely_pathogenic | 0.8737 | pathogenic | -0.859 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/I | 0.9166 | likely_pathogenic | 0.9117 | pathogenic | -0.278 | Destabilizing | 0.988 | D | 0.807 | deleterious | None | None | None | None | N |
E/K | 0.7582 | likely_pathogenic | 0.7223 | pathogenic | -1.202 | Destabilizing | 0.896 | D | 0.629 | neutral | N | 0.521580173 | None | None | N |
E/L | 0.8898 | likely_pathogenic | 0.8642 | pathogenic | -0.278 | Destabilizing | 0.976 | D | 0.762 | deleterious | None | None | None | None | N |
E/M | 0.8419 | likely_pathogenic | 0.8287 | pathogenic | 0.397 | Stabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
E/N | 0.8687 | likely_pathogenic | 0.828 | pathogenic | -1.398 | Destabilizing | 0.919 | D | 0.643 | neutral | None | None | None | None | N |
E/P | 0.9992 | likely_pathogenic | 0.9987 | pathogenic | -0.626 | Destabilizing | 0.988 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/Q | 0.2297 | likely_benign | 0.2129 | benign | -1.136 | Destabilizing | 0.984 | D | 0.661 | neutral | N | 0.519769668 | None | None | N |
E/R | 0.8384 | likely_pathogenic | 0.8059 | pathogenic | -1.059 | Destabilizing | 0.976 | D | 0.668 | neutral | None | None | None | None | N |
E/S | 0.6136 | likely_pathogenic | 0.5747 | pathogenic | -2.016 | Highly Destabilizing | 0.132 | N | 0.469 | neutral | None | None | None | None | N |
E/T | 0.7907 | likely_pathogenic | 0.7663 | pathogenic | -1.656 | Destabilizing | 0.851 | D | 0.651 | neutral | None | None | None | None | N |
E/V | 0.7818 | likely_pathogenic | 0.7736 | pathogenic | -0.626 | Destabilizing | 0.968 | D | 0.727 | prob.delet. | D | 0.532824801 | None | None | N |
E/W | 0.9867 | likely_pathogenic | 0.9842 | pathogenic | -1.114 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
E/Y | 0.9621 | likely_pathogenic | 0.9549 | pathogenic | -0.829 | Destabilizing | 0.996 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.