Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31057 | 93394;93395;93396 | chr2:178548457;178548456;178548455 | chr2:179413184;179413183;179413182 |
N2AB | 29416 | 88471;88472;88473 | chr2:178548457;178548456;178548455 | chr2:179413184;179413183;179413182 |
N2A | 28489 | 85690;85691;85692 | chr2:178548457;178548456;178548455 | chr2:179413184;179413183;179413182 |
N2B | 21992 | 66199;66200;66201 | chr2:178548457;178548456;178548455 | chr2:179413184;179413183;179413182 |
Novex-1 | 22117 | 66574;66575;66576 | chr2:178548457;178548456;178548455 | chr2:179413184;179413183;179413182 |
Novex-2 | 22184 | 66775;66776;66777 | chr2:178548457;178548456;178548455 | chr2:179413184;179413183;179413182 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs759940210 | None | 0.999 | N | 0.494 | 0.173 | 0.254244900254 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07555E-04 | 0 |
E/D | rs759940210 | None | 0.999 | N | 0.494 | 0.173 | 0.254244900254 | gnomAD-4.0.0 | 1.85904E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.29395E-05 | 0 |
E/G | rs1353038457 | None | 1.0 | N | 0.704 | 0.559 | 0.603539076606 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1353038457 | None | 1.0 | N | 0.704 | 0.559 | 0.603539076606 | gnomAD-4.0.0 | 6.5741E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs767977295 | -0.556 | 0.999 | N | 0.581 | 0.416 | 0.486422812247 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/K | rs767977295 | -0.556 | 0.999 | N | 0.581 | 0.416 | 0.486422812247 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs767977295 | -0.556 | 0.999 | N | 0.581 | 0.416 | 0.486422812247 | gnomAD-4.0.0 | 6.57125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46981E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6397 | likely_pathogenic | 0.5787 | pathogenic | -0.769 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.492488461 | None | None | N |
E/C | 0.9869 | likely_pathogenic | 0.9823 | pathogenic | -0.506 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
E/D | 0.369 | ambiguous | 0.3368 | benign | -1.424 | Destabilizing | 0.999 | D | 0.494 | neutral | N | 0.459569358 | None | None | N |
E/F | 0.9849 | likely_pathogenic | 0.981 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/G | 0.7668 | likely_pathogenic | 0.7314 | pathogenic | -1.203 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.497617022 | None | None | N |
E/H | 0.9463 | likely_pathogenic | 0.9307 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
E/I | 0.9011 | likely_pathogenic | 0.8714 | pathogenic | 0.436 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
E/K | 0.8257 | likely_pathogenic | 0.7704 | pathogenic | -0.9 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.47145769 | None | None | N |
E/L | 0.8708 | likely_pathogenic | 0.8434 | pathogenic | 0.436 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
E/M | 0.8986 | likely_pathogenic | 0.8681 | pathogenic | 0.954 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/N | 0.8408 | likely_pathogenic | 0.809 | pathogenic | -1.441 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/P | 0.9298 | likely_pathogenic | 0.9039 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
E/Q | 0.6142 | likely_pathogenic | 0.5456 | ambiguous | -1.226 | Destabilizing | 1.0 | D | 0.618 | neutral | N | 0.491701539 | None | None | N |
E/R | 0.9074 | likely_pathogenic | 0.8691 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/S | 0.7932 | likely_pathogenic | 0.7594 | pathogenic | -1.84 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
E/T | 0.854 | likely_pathogenic | 0.8233 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/V | 0.7687 | likely_pathogenic | 0.7139 | pathogenic | 0.056 | Stabilizing | 1.0 | D | 0.788 | deleterious | N | 0.498769111 | None | None | N |
E/W | 0.9952 | likely_pathogenic | 0.9939 | pathogenic | 0.141 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/Y | 0.9745 | likely_pathogenic | 0.9695 | pathogenic | 0.196 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.