Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31061 | 93406;93407;93408 | chr2:178548445;178548444;178548443 | chr2:179413172;179413171;179413170 |
N2AB | 29420 | 88483;88484;88485 | chr2:178548445;178548444;178548443 | chr2:179413172;179413171;179413170 |
N2A | 28493 | 85702;85703;85704 | chr2:178548445;178548444;178548443 | chr2:179413172;179413171;179413170 |
N2B | 21996 | 66211;66212;66213 | chr2:178548445;178548444;178548443 | chr2:179413172;179413171;179413170 |
Novex-1 | 22121 | 66586;66587;66588 | chr2:178548445;178548444;178548443 | chr2:179413172;179413171;179413170 |
Novex-2 | 22188 | 66787;66788;66789 | chr2:178548445;178548444;178548443 | chr2:179413172;179413171;179413170 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs768270597 | -0.219 | 1.0 | N | 0.479 | 0.317 | 0.659234351692 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 8.92E-06 | 0 |
R/C | rs768270597 | -0.219 | 1.0 | N | 0.479 | 0.317 | 0.659234351692 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/C | rs768270597 | -0.219 | 1.0 | N | 0.479 | 0.317 | 0.659234351692 | gnomAD-4.0.0 | 3.71818E-06 | None | None | None | None | N | None | 2.67065E-05 | 0 | None | 0 | 2.22826E-05 | None | 0 | 0 | 2.54279E-06 | 0 | 0 |
R/H | rs727504923 | -0.532 | 0.999 | N | 0.506 | 0.284 | None | gnomAD-2.1.1 | 3.58E-05 | None | None | None | None | N | None | 2.06714E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.92E-05 | 0 |
R/H | rs727504923 | -0.532 | 0.999 | N | 0.506 | 0.284 | None | gnomAD-3.1.2 | 7.89E-05 | None | None | None | None | N | None | 2.41359E-04 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/H | rs727504923 | -0.532 | 0.999 | N | 0.506 | 0.284 | None | gnomAD-4.0.0 | 2.66461E-05 | None | None | None | None | N | None | 2.26957E-04 | 3.33356E-05 | None | 0 | 0 | None | 0 | 0 | 1.8647E-05 | 1.09786E-05 | 1.60102E-05 |
R/P | rs727504923 | None | 0.998 | N | 0.493 | 0.282 | 0.408172294925 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/P | rs727504923 | None | 0.998 | N | 0.493 | 0.282 | 0.408172294925 | gnomAD-4.0.0 | 6.57246E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47011E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.842 | likely_pathogenic | 0.7411 | pathogenic | -0.071 | Destabilizing | 0.927 | D | 0.449 | neutral | None | None | None | None | N |
R/C | 0.4446 | ambiguous | 0.4001 | ambiguous | -0.386 | Destabilizing | 1.0 | D | 0.479 | neutral | N | 0.497284173 | None | None | N |
R/D | 0.9627 | likely_pathogenic | 0.933 | pathogenic | -0.373 | Destabilizing | 0.997 | D | 0.489 | neutral | None | None | None | None | N |
R/E | 0.8678 | likely_pathogenic | 0.7871 | pathogenic | -0.347 | Destabilizing | 0.99 | D | 0.498 | neutral | None | None | None | None | N |
R/F | 0.8576 | likely_pathogenic | 0.793 | pathogenic | -0.424 | Destabilizing | 0.982 | D | 0.483 | neutral | None | None | None | None | N |
R/G | 0.706 | likely_pathogenic | 0.5914 | pathogenic | -0.182 | Destabilizing | 0.994 | D | 0.474 | neutral | N | 0.448634714 | None | None | N |
R/H | 0.2893 | likely_benign | 0.2501 | benign | -0.608 | Destabilizing | 0.999 | D | 0.506 | neutral | N | 0.474153488 | None | None | N |
R/I | 0.6611 | likely_pathogenic | 0.5614 | ambiguous | 0.175 | Stabilizing | 0.884 | D | 0.457 | neutral | None | None | None | None | N |
R/K | 0.224 | likely_benign | 0.1797 | benign | -0.318 | Destabilizing | 0.975 | D | 0.471 | neutral | None | None | None | None | N |
R/L | 0.4793 | ambiguous | 0.3911 | ambiguous | 0.175 | Stabilizing | 0.037 | N | 0.294 | neutral | N | 0.472765155 | None | None | N |
R/M | 0.6753 | likely_pathogenic | 0.5587 | ambiguous | -0.187 | Destabilizing | 0.982 | D | 0.478 | neutral | None | None | None | None | N |
R/N | 0.914 | likely_pathogenic | 0.852 | pathogenic | -0.246 | Destabilizing | 0.997 | D | 0.476 | neutral | None | None | None | None | N |
R/P | 0.8489 | likely_pathogenic | 0.7594 | pathogenic | 0.109 | Stabilizing | 0.998 | D | 0.493 | neutral | N | 0.494775223 | None | None | N |
R/Q | 0.2768 | likely_benign | 0.2212 | benign | -0.281 | Destabilizing | 0.997 | D | 0.471 | neutral | None | None | None | None | N |
R/S | 0.9107 | likely_pathogenic | 0.8508 | pathogenic | -0.414 | Destabilizing | 0.994 | D | 0.503 | neutral | N | 0.469647492 | None | None | N |
R/T | 0.7982 | likely_pathogenic | 0.6767 | pathogenic | -0.295 | Destabilizing | 0.969 | D | 0.473 | neutral | None | None | None | None | N |
R/V | 0.7418 | likely_pathogenic | 0.6483 | pathogenic | 0.109 | Stabilizing | 0.884 | D | 0.431 | neutral | None | None | None | None | N |
R/W | 0.469 | ambiguous | 0.4093 | ambiguous | -0.619 | Destabilizing | 0.999 | D | 0.489 | neutral | None | None | None | None | N |
R/Y | 0.7025 | likely_pathogenic | 0.6202 | pathogenic | -0.233 | Destabilizing | 0.997 | D | 0.487 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.