Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31067 | 93424;93425;93426 | chr2:178548427;178548426;178548425 | chr2:179413154;179413153;179413152 |
N2AB | 29426 | 88501;88502;88503 | chr2:178548427;178548426;178548425 | chr2:179413154;179413153;179413152 |
N2A | 28499 | 85720;85721;85722 | chr2:178548427;178548426;178548425 | chr2:179413154;179413153;179413152 |
N2B | 22002 | 66229;66230;66231 | chr2:178548427;178548426;178548425 | chr2:179413154;179413153;179413152 |
Novex-1 | 22127 | 66604;66605;66606 | chr2:178548427;178548426;178548425 | chr2:179413154;179413153;179413152 |
Novex-2 | 22194 | 66805;66806;66807 | chr2:178548427;178548426;178548425 | chr2:179413154;179413153;179413152 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs373173796 | None | 0.896 | N | 0.501 | 0.152 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/T | rs373173796 | None | 0.896 | N | 0.501 | 0.152 | None | gnomAD-4.0.0 | 6.57289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47003E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0832 | likely_benign | 0.0896 | benign | -0.499 | Destabilizing | 0.825 | D | 0.46 | neutral | None | None | None | None | N |
S/C | 0.0914 | likely_benign | 0.0918 | benign | -0.37 | Destabilizing | 0.999 | D | 0.633 | neutral | N | 0.517252225 | None | None | N |
S/D | 0.4783 | ambiguous | 0.4964 | ambiguous | -0.086 | Destabilizing | 0.851 | D | 0.566 | neutral | None | None | None | None | N |
S/E | 0.6365 | likely_pathogenic | 0.6574 | pathogenic | -0.018 | Destabilizing | 0.919 | D | 0.566 | neutral | None | None | None | None | N |
S/F | 0.3109 | likely_benign | 0.3498 | ambiguous | -0.594 | Destabilizing | 0.988 | D | 0.655 | neutral | None | None | None | None | N |
S/G | 0.1007 | likely_benign | 0.0976 | benign | -0.808 | Destabilizing | 0.811 | D | 0.502 | neutral | N | 0.488892187 | None | None | N |
S/H | 0.3885 | ambiguous | 0.3996 | ambiguous | -1.241 | Destabilizing | 0.997 | D | 0.634 | neutral | None | None | None | None | N |
S/I | 0.2188 | likely_benign | 0.2453 | benign | 0.225 | Stabilizing | 0.811 | D | 0.565 | neutral | N | 0.517308153 | None | None | N |
S/K | 0.7755 | likely_pathogenic | 0.7923 | pathogenic | -0.358 | Destabilizing | 0.919 | D | 0.573 | neutral | None | None | None | None | N |
S/L | 0.1223 | likely_benign | 0.1345 | benign | 0.225 | Stabilizing | 0.851 | D | 0.539 | neutral | None | None | None | None | N |
S/M | 0.2048 | likely_benign | 0.2149 | benign | 0.173 | Stabilizing | 0.997 | D | 0.635 | neutral | None | None | None | None | N |
S/N | 0.1543 | likely_benign | 0.161 | benign | -0.589 | Destabilizing | 0.026 | N | 0.315 | neutral | N | 0.448504215 | None | None | N |
S/P | 0.7781 | likely_pathogenic | 0.7658 | pathogenic | 0.02 | Stabilizing | 0.996 | D | 0.635 | neutral | None | None | None | None | N |
S/Q | 0.5673 | likely_pathogenic | 0.5735 | pathogenic | -0.528 | Destabilizing | 0.988 | D | 0.627 | neutral | None | None | None | None | N |
S/R | 0.7211 | likely_pathogenic | 0.7308 | pathogenic | -0.481 | Destabilizing | 0.968 | D | 0.629 | neutral | D | 0.523330048 | None | None | N |
S/T | 0.0739 | likely_benign | 0.0765 | benign | -0.483 | Destabilizing | 0.896 | D | 0.501 | neutral | N | 0.402193136 | None | None | N |
S/V | 0.1997 | likely_benign | 0.2194 | benign | 0.02 | Stabilizing | 0.261 | N | 0.381 | neutral | None | None | None | None | N |
S/W | 0.447 | ambiguous | 0.4855 | ambiguous | -0.703 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
S/Y | 0.2545 | likely_benign | 0.2772 | benign | -0.33 | Destabilizing | 0.996 | D | 0.655 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.