Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3107 | 9544;9545;9546 | chr2:178767911;178767910;178767909 | chr2:179632638;179632637;179632636 |
N2AB | 3107 | 9544;9545;9546 | chr2:178767911;178767910;178767909 | chr2:179632638;179632637;179632636 |
N2A | 3107 | 9544;9545;9546 | chr2:178767911;178767910;178767909 | chr2:179632638;179632637;179632636 |
N2B | 3061 | 9406;9407;9408 | chr2:178767911;178767910;178767909 | chr2:179632638;179632637;179632636 |
Novex-1 | 3061 | 9406;9407;9408 | chr2:178767911;178767910;178767909 | chr2:179632638;179632637;179632636 |
Novex-2 | 3061 | 9406;9407;9408 | chr2:178767911;178767910;178767909 | chr2:179632638;179632637;179632636 |
Novex-3 | 3107 | 9544;9545;9546 | chr2:178767911;178767910;178767909 | chr2:179632638;179632637;179632636 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs764095381 | 0.362 | 0.454 | N | 0.427 | 0.248 | 0.319970858106 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
K/E | rs764095381 | 0.362 | 0.454 | N | 0.427 | 0.248 | 0.319970858106 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs764095381 | 0.362 | 0.454 | N | 0.427 | 0.248 | 0.319970858106 | gnomAD-4.0.0 | 5.12262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.56732E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7115 | likely_pathogenic | 0.7682 | pathogenic | -0.332 | Destabilizing | 0.525 | D | 0.478 | neutral | None | None | None | None | N |
K/C | 0.9139 | likely_pathogenic | 0.9352 | pathogenic | -0.3 | Destabilizing | 0.998 | D | 0.532 | neutral | None | None | None | None | N |
K/D | 0.8715 | likely_pathogenic | 0.9036 | pathogenic | -0.172 | Destabilizing | 0.842 | D | 0.494 | neutral | None | None | None | None | N |
K/E | 0.4123 | ambiguous | 0.4816 | ambiguous | -0.1 | Destabilizing | 0.454 | N | 0.427 | neutral | N | 0.434129062 | None | None | N |
K/F | 0.971 | likely_pathogenic | 0.9779 | pathogenic | -0.151 | Destabilizing | 0.991 | D | 0.545 | neutral | None | None | None | None | N |
K/G | 0.7827 | likely_pathogenic | 0.8398 | pathogenic | -0.669 | Destabilizing | 0.688 | D | 0.554 | neutral | None | None | None | None | N |
K/H | 0.581 | likely_pathogenic | 0.6381 | pathogenic | -1.134 | Destabilizing | 0.974 | D | 0.504 | neutral | None | None | None | None | N |
K/I | 0.8037 | likely_pathogenic | 0.8502 | pathogenic | 0.518 | Stabilizing | 0.974 | D | 0.539 | neutral | None | None | None | None | N |
K/L | 0.7863 | likely_pathogenic | 0.8311 | pathogenic | 0.518 | Stabilizing | 0.842 | D | 0.541 | neutral | None | None | None | None | N |
K/M | 0.5813 | likely_pathogenic | 0.646 | pathogenic | 0.458 | Stabilizing | 0.989 | D | 0.508 | neutral | N | 0.512123715 | None | None | N |
K/N | 0.7099 | likely_pathogenic | 0.7853 | pathogenic | -0.222 | Destabilizing | 0.801 | D | 0.44 | neutral | N | 0.445140607 | None | None | N |
K/P | 0.9378 | likely_pathogenic | 0.9477 | pathogenic | 0.265 | Stabilizing | 0.915 | D | 0.505 | neutral | None | None | None | None | N |
K/Q | 0.229 | likely_benign | 0.2667 | benign | -0.357 | Destabilizing | 0.051 | N | 0.211 | neutral | N | 0.41211662 | None | None | N |
K/R | 0.1026 | likely_benign | 0.1135 | benign | -0.538 | Destabilizing | 0.012 | N | 0.208 | neutral | N | 0.451951631 | None | None | N |
K/S | 0.7194 | likely_pathogenic | 0.7832 | pathogenic | -0.786 | Destabilizing | 0.08 | N | 0.21 | neutral | None | None | None | None | N |
K/T | 0.4048 | ambiguous | 0.4663 | ambiguous | -0.527 | Destabilizing | 0.669 | D | 0.481 | neutral | N | 0.431896714 | None | None | N |
K/V | 0.741 | likely_pathogenic | 0.7823 | pathogenic | 0.265 | Stabilizing | 0.915 | D | 0.547 | neutral | None | None | None | None | N |
K/W | 0.9378 | likely_pathogenic | 0.9492 | pathogenic | -0.065 | Destabilizing | 0.998 | D | 0.546 | neutral | None | None | None | None | N |
K/Y | 0.8982 | likely_pathogenic | 0.9197 | pathogenic | 0.237 | Stabilizing | 0.991 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.