Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3107293439;93440;93441 chr2:178548412;178548411;178548410chr2:179413139;179413138;179413137
N2AB2943188516;88517;88518 chr2:178548412;178548411;178548410chr2:179413139;179413138;179413137
N2A2850485735;85736;85737 chr2:178548412;178548411;178548410chr2:179413139;179413138;179413137
N2B2200766244;66245;66246 chr2:178548412;178548411;178548410chr2:179413139;179413138;179413137
Novex-12213266619;66620;66621 chr2:178548412;178548411;178548410chr2:179413139;179413138;179413137
Novex-22219966820;66821;66822 chr2:178548412;178548411;178548410chr2:179413139;179413138;179413137
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Fn3-114
  • Domain position: 57
  • Structural Position: 88
  • Q(SASA): 0.7218
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs368932767 0.019 1.0 N 0.639 0.422 None gnomAD-2.1.1 5.37E-05 None None None None N None 4.14E-05 0 None 0 5.12E-05 None 0 None 7.99E-05 8.63E-05 0
R/C rs368932767 0.019 1.0 N 0.639 0.422 None gnomAD-3.1.2 1.05184E-04 None None None None N None 7.24E-05 6.55E-05 0 0 0 None 9.42E-05 0 1.61727E-04 0 0
R/C rs368932767 0.019 1.0 N 0.639 0.422 None gnomAD-4.0.0 1.14644E-04 None None None None N None 5.34017E-05 1.66711E-05 None 0 1.55971E-04 None 3.12529E-05 0 1.33921E-04 1.09796E-05 1.92111E-04
R/G rs368932767 -0.154 0.998 N 0.475 0.413 0.451882325854 gnomAD-2.1.1 4.03E-06 None None None None N None 0 0 None 0 0 None 3.27E-05 None 0 0 0
R/G rs368932767 -0.154 0.998 N 0.475 0.413 0.451882325854 gnomAD-4.0.0 2.05257E-06 None None None None N None 0 0 None 0 0 None 0 0 0 3.47802E-05 0
R/H rs141817409 -0.69 0.783 N 0.297 0.265 None gnomAD-2.1.1 1.14448E-04 None None None None N None 9.51199E-04 1.97997E-04 None 0 0 None 0 None 4E-05 7.84E-06 0
R/H rs141817409 -0.69 0.783 N 0.297 0.265 None gnomAD-3.1.2 2.8928E-04 None None None None N None 9.41256E-04 6.55E-05 0 0 1.93125E-04 None 9.43E-05 0 2.94E-05 0 0
R/H rs141817409 -0.69 0.783 N 0.297 0.265 None 1000 genomes 7.98722E-04 None None None None N None 3E-03 0 None None 0 0 None None None 0 None
R/H rs141817409 -0.69 0.783 N 0.297 0.265 None gnomAD-4.0.0 7.74568E-05 None None None None N None 1.07957E-03 1.83284E-04 None 0 6.68688E-05 None 1.56299E-05 0 2.11902E-05 0 6.40184E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.843 likely_pathogenic 0.8013 pathogenic 0.096 Stabilizing 0.996 D 0.536 neutral None None None None N
R/C 0.4655 ambiguous 0.4595 ambiguous -0.172 Destabilizing 1.0 D 0.639 neutral N 0.482004301 None None N
R/D 0.9428 likely_pathogenic 0.9229 pathogenic -0.214 Destabilizing 0.999 D 0.553 neutral None None None None N
R/E 0.8349 likely_pathogenic 0.7849 pathogenic -0.156 Destabilizing 0.992 D 0.522 neutral None None None None N
R/F 0.9118 likely_pathogenic 0.8979 pathogenic -0.161 Destabilizing 0.999 D 0.625 neutral None None None None N
R/G 0.6424 likely_pathogenic 0.5882 pathogenic -0.077 Destabilizing 0.998 D 0.475 neutral N 0.47442138 None None N
R/H 0.2595 likely_benign 0.2412 benign -0.59 Destabilizing 0.783 D 0.297 neutral N 0.520231028 None None N
R/I 0.8414 likely_pathogenic 0.7772 pathogenic 0.509 Stabilizing 1.0 D 0.621 neutral None None None None N
R/K 0.2485 likely_benign 0.2369 benign -0.069 Destabilizing 0.99 D 0.496 neutral None None None None N
R/L 0.6771 likely_pathogenic 0.6284 pathogenic 0.509 Stabilizing 0.999 D 0.477 neutral N 0.470519411 None None N
R/M 0.798 likely_pathogenic 0.7469 pathogenic 0.004 Stabilizing 1.0 D 0.597 neutral None None None None N
R/N 0.9028 likely_pathogenic 0.881 pathogenic 0.034 Stabilizing 0.992 D 0.549 neutral None None None None N
R/P 0.9393 likely_pathogenic 0.9212 pathogenic 0.391 Stabilizing 1.0 D 0.6 neutral N 0.465746471 None None N
R/Q 0.2762 likely_benign 0.247 benign -0.004 Destabilizing 0.999 D 0.583 neutral None None None None N
R/S 0.8633 likely_pathogenic 0.8255 pathogenic -0.184 Destabilizing 0.998 D 0.54 neutral N 0.460201289 None None N
R/T 0.7982 likely_pathogenic 0.7149 pathogenic -0.004 Destabilizing 1.0 D 0.537 neutral None None None None N
R/V 0.8537 likely_pathogenic 0.8072 pathogenic 0.391 Stabilizing 1.0 D 0.622 neutral None None None None N
R/W 0.4744 ambiguous 0.4449 ambiguous -0.306 Destabilizing 1.0 D 0.643 neutral None None None None N
R/Y 0.7363 likely_pathogenic 0.7216 pathogenic 0.111 Stabilizing 0.998 D 0.609 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.