Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3108 | 9547;9548;9549 | chr2:178767908;178767907;178767906 | chr2:179632635;179632634;179632633 |
N2AB | 3108 | 9547;9548;9549 | chr2:178767908;178767907;178767906 | chr2:179632635;179632634;179632633 |
N2A | 3108 | 9547;9548;9549 | chr2:178767908;178767907;178767906 | chr2:179632635;179632634;179632633 |
N2B | 3062 | 9409;9410;9411 | chr2:178767908;178767907;178767906 | chr2:179632635;179632634;179632633 |
Novex-1 | 3062 | 9409;9410;9411 | chr2:178767908;178767907;178767906 | chr2:179632635;179632634;179632633 |
Novex-2 | 3062 | 9409;9410;9411 | chr2:178767908;178767907;178767906 | chr2:179632635;179632634;179632633 |
Novex-3 | 3108 | 9547;9548;9549 | chr2:178767908;178767907;178767906 | chr2:179632635;179632634;179632633 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs756206178 | -0.39 | 0.999 | N | 0.424 | 0.264 | 0.233150807113 | gnomAD-2.1.1 | 1.06E-05 | None | None | None | None | N | None | 1.20163E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs756206178 | -0.39 | 0.999 | N | 0.424 | 0.264 | 0.233150807113 | gnomAD-3.1.2 | 4.6E-05 | None | None | None | None | N | None | 1.68903E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs756206178 | -0.39 | 0.999 | N | 0.424 | 0.264 | 0.233150807113 | gnomAD-4.0.0 | 8.67421E-06 | None | None | None | None | N | None | 1.86861E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.743 | likely_pathogenic | 0.7652 | pathogenic | -0.683 | Destabilizing | 0.999 | D | 0.599 | neutral | N | 0.514811077 | None | None | N |
E/C | 0.9943 | likely_pathogenic | 0.9942 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/D | 0.2865 | likely_benign | 0.3423 | ambiguous | -0.762 | Destabilizing | 0.999 | D | 0.424 | neutral | N | 0.423860967 | None | None | N |
E/F | 0.9842 | likely_pathogenic | 0.986 | pathogenic | -0.257 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/G | 0.6335 | likely_pathogenic | 0.6671 | pathogenic | -0.965 | Destabilizing | 1.0 | D | 0.651 | neutral | N | 0.515365179 | None | None | N |
E/H | 0.9579 | likely_pathogenic | 0.9577 | pathogenic | -0.242 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
E/I | 0.9245 | likely_pathogenic | 0.9307 | pathogenic | 0.062 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/K | 0.8155 | likely_pathogenic | 0.8118 | pathogenic | -0.36 | Destabilizing | 0.999 | D | 0.55 | neutral | N | 0.506106153 | None | None | N |
E/L | 0.9281 | likely_pathogenic | 0.9332 | pathogenic | 0.062 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/M | 0.9316 | likely_pathogenic | 0.9407 | pathogenic | 0.231 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | N |
E/N | 0.7613 | likely_pathogenic | 0.8048 | pathogenic | -0.765 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
E/P | 0.9945 | likely_pathogenic | 0.9941 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
E/Q | 0.6144 | likely_pathogenic | 0.6154 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.551 | neutral | N | 0.514640214 | None | None | N |
E/R | 0.8892 | likely_pathogenic | 0.8825 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
E/S | 0.7669 | likely_pathogenic | 0.7996 | pathogenic | -0.976 | Destabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | N |
E/T | 0.8291 | likely_pathogenic | 0.8531 | pathogenic | -0.751 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/V | 0.8039 | likely_pathogenic | 0.8172 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | D | 0.547497417 | None | None | N |
E/W | 0.9943 | likely_pathogenic | 0.9943 | pathogenic | -0.027 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/Y | 0.9691 | likely_pathogenic | 0.9708 | pathogenic | -0.026 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.