Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31084 | 93475;93476;93477 | chr2:178548376;178548375;178548374 | chr2:179413103;179413102;179413101 |
N2AB | 29443 | 88552;88553;88554 | chr2:178548376;178548375;178548374 | chr2:179413103;179413102;179413101 |
N2A | 28516 | 85771;85772;85773 | chr2:178548376;178548375;178548374 | chr2:179413103;179413102;179413101 |
N2B | 22019 | 66280;66281;66282 | chr2:178548376;178548375;178548374 | chr2:179413103;179413102;179413101 |
Novex-1 | 22144 | 66655;66656;66657 | chr2:178548376;178548375;178548374 | chr2:179413103;179413102;179413101 |
Novex-2 | 22211 | 66856;66857;66858 | chr2:178548376;178548375;178548374 | chr2:179413103;179413102;179413101 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.484 | N | 0.56 | 0.362 | 0.706306783786 | gnomAD-4.0.0 | 6.84184E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1618 | likely_benign | 0.1518 | benign | -1.372 | Destabilizing | None | N | 0.261 | neutral | N | 0.39447773 | None | None | N |
V/C | 0.5822 | likely_pathogenic | 0.5833 | pathogenic | -0.796 | Destabilizing | 0.824 | D | 0.464 | neutral | None | None | None | None | N |
V/D | 0.4335 | ambiguous | 0.3946 | ambiguous | -1.123 | Destabilizing | 0.484 | N | 0.56 | neutral | N | 0.488428041 | None | None | N |
V/E | 0.3361 | likely_benign | 0.3115 | benign | -1.106 | Destabilizing | 0.38 | N | 0.479 | neutral | None | None | None | None | N |
V/F | 0.152 | likely_benign | 0.1558 | benign | -1.018 | Destabilizing | 0.317 | N | 0.467 | neutral | N | 0.518404231 | None | None | N |
V/G | 0.2138 | likely_benign | 0.2039 | benign | -1.7 | Destabilizing | 0.188 | N | 0.509 | neutral | N | 0.410217973 | None | None | N |
V/H | 0.4957 | ambiguous | 0.4591 | ambiguous | -1.21 | Destabilizing | 0.935 | D | 0.545 | neutral | None | None | None | None | N |
V/I | 0.0673 | likely_benign | 0.0693 | benign | -0.57 | Destabilizing | None | N | 0.242 | neutral | N | 0.451256519 | None | None | N |
V/K | 0.3969 | ambiguous | 0.3476 | ambiguous | -1.11 | Destabilizing | 0.38 | N | 0.451 | neutral | None | None | None | None | N |
V/L | 0.1436 | likely_benign | 0.1477 | benign | -0.57 | Destabilizing | None | N | 0.147 | neutral | N | 0.450813802 | None | None | N |
V/M | 0.0955 | likely_benign | 0.0976 | benign | -0.434 | Destabilizing | 0.035 | N | 0.4 | neutral | None | None | None | None | N |
V/N | 0.1989 | likely_benign | 0.1948 | benign | -0.932 | Destabilizing | 0.555 | D | 0.563 | neutral | None | None | None | None | N |
V/P | 0.8548 | likely_pathogenic | 0.841 | pathogenic | -0.802 | Destabilizing | 0.555 | D | 0.511 | neutral | None | None | None | None | N |
V/Q | 0.2733 | likely_benign | 0.2523 | benign | -1.064 | Destabilizing | 0.555 | D | 0.506 | neutral | None | None | None | None | N |
V/R | 0.3949 | ambiguous | 0.3499 | ambiguous | -0.625 | Destabilizing | 0.38 | N | 0.564 | neutral | None | None | None | None | N |
V/S | 0.1612 | likely_benign | 0.1488 | benign | -1.446 | Destabilizing | 0.081 | N | 0.439 | neutral | None | None | None | None | N |
V/T | 0.1463 | likely_benign | 0.1342 | benign | -1.314 | Destabilizing | 0.149 | N | 0.447 | neutral | None | None | None | None | N |
V/W | 0.7843 | likely_pathogenic | 0.7808 | pathogenic | -1.237 | Destabilizing | 0.935 | D | 0.596 | neutral | None | None | None | None | N |
V/Y | 0.4563 | ambiguous | 0.4488 | ambiguous | -0.919 | Destabilizing | 0.555 | D | 0.481 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.