Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3109 | 9550;9551;9552 | chr2:178767905;178767904;178767903 | chr2:179632632;179632631;179632630 |
N2AB | 3109 | 9550;9551;9552 | chr2:178767905;178767904;178767903 | chr2:179632632;179632631;179632630 |
N2A | 3109 | 9550;9551;9552 | chr2:178767905;178767904;178767903 | chr2:179632632;179632631;179632630 |
N2B | 3063 | 9412;9413;9414 | chr2:178767905;178767904;178767903 | chr2:179632632;179632631;179632630 |
Novex-1 | 3063 | 9412;9413;9414 | chr2:178767905;178767904;178767903 | chr2:179632632;179632631;179632630 |
Novex-2 | 3063 | 9412;9413;9414 | chr2:178767905;178767904;178767903 | chr2:179632632;179632631;179632630 |
Novex-3 | 3109 | 9550;9551;9552 | chr2:178767905;178767904;178767903 | chr2:179632632;179632631;179632630 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs753036867 | -0.007 | 0.02 | N | 0.245 | 0.107 | None | gnomAD-2.1.1 | 1.77E-05 | None | None | None | None | N | None | 2.0024E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs753036867 | -0.007 | 0.02 | N | 0.245 | 0.107 | None | gnomAD-3.1.2 | 6.57E-05 | None | None | None | None | N | None | 2.41336E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs753036867 | -0.007 | 0.02 | N | 0.245 | 0.107 | None | gnomAD-4.0.0 | 1.11527E-05 | None | None | None | None | N | None | 2.40276E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7223 | likely_pathogenic | 0.7043 | pathogenic | -0.382 | Destabilizing | 0.953 | D | 0.482 | neutral | None | None | None | None | N |
K/C | 0.9231 | likely_pathogenic | 0.9136 | pathogenic | -0.395 | Destabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
K/D | 0.8165 | likely_pathogenic | 0.7827 | pathogenic | -0.043 | Destabilizing | 0.993 | D | 0.459 | neutral | None | None | None | None | N |
K/E | 0.6098 | likely_pathogenic | 0.5776 | pathogenic | 0.051 | Stabilizing | 0.939 | D | 0.457 | neutral | N | 0.475396243 | None | None | N |
K/F | 0.9603 | likely_pathogenic | 0.9568 | pathogenic | -0.177 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | N |
K/G | 0.6557 | likely_pathogenic | 0.5963 | pathogenic | -0.7 | Destabilizing | 0.993 | D | 0.412 | neutral | None | None | None | None | N |
K/H | 0.5732 | likely_pathogenic | 0.574 | pathogenic | -0.96 | Destabilizing | 0.998 | D | 0.462 | neutral | None | None | None | None | N |
K/I | 0.8235 | likely_pathogenic | 0.8287 | pathogenic | 0.422 | Stabilizing | 0.991 | D | 0.559 | neutral | N | 0.509420387 | None | None | N |
K/L | 0.7457 | likely_pathogenic | 0.7459 | pathogenic | 0.422 | Stabilizing | 0.986 | D | 0.412 | neutral | None | None | None | None | N |
K/M | 0.6033 | likely_pathogenic | 0.6126 | pathogenic | 0.08 | Stabilizing | 0.999 | D | 0.47 | neutral | None | None | None | None | N |
K/N | 0.6008 | likely_pathogenic | 0.5683 | pathogenic | -0.241 | Destabilizing | 0.982 | D | 0.451 | neutral | N | 0.476916222 | None | None | N |
K/P | 0.8652 | likely_pathogenic | 0.8433 | pathogenic | 0.184 | Stabilizing | 0.998 | D | 0.451 | neutral | None | None | None | None | N |
K/Q | 0.342 | ambiguous | 0.3306 | benign | -0.255 | Destabilizing | 0.982 | D | 0.46 | neutral | N | 0.49779072 | None | None | N |
K/R | 0.1054 | likely_benign | 0.1014 | benign | -0.425 | Destabilizing | 0.02 | N | 0.245 | neutral | N | 0.453690294 | None | None | N |
K/S | 0.7563 | likely_pathogenic | 0.7293 | pathogenic | -0.766 | Destabilizing | 0.953 | D | 0.422 | neutral | None | None | None | None | N |
K/T | 0.5548 | ambiguous | 0.5542 | ambiguous | -0.48 | Destabilizing | 0.991 | D | 0.412 | neutral | N | 0.502986472 | None | None | N |
K/V | 0.8027 | likely_pathogenic | 0.7989 | pathogenic | 0.184 | Stabilizing | 0.993 | D | 0.495 | neutral | None | None | None | None | N |
K/W | 0.9335 | likely_pathogenic | 0.9288 | pathogenic | -0.15 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
K/Y | 0.8644 | likely_pathogenic | 0.8509 | pathogenic | 0.137 | Stabilizing | 0.998 | D | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.