Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31096 | 93511;93512;93513 | chr2:178548340;178548339;178548338 | chr2:179413067;179413066;179413065 |
N2AB | 29455 | 88588;88589;88590 | chr2:178548340;178548339;178548338 | chr2:179413067;179413066;179413065 |
N2A | 28528 | 85807;85808;85809 | chr2:178548340;178548339;178548338 | chr2:179413067;179413066;179413065 |
N2B | 22031 | 66316;66317;66318 | chr2:178548340;178548339;178548338 | chr2:179413067;179413066;179413065 |
Novex-1 | 22156 | 66691;66692;66693 | chr2:178548340;178548339;178548338 | chr2:179413067;179413066;179413065 |
Novex-2 | 22223 | 66892;66893;66894 | chr2:178548340;178548339;178548338 | chr2:179413067;179413066;179413065 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.783 | 0.51 | 0.528561964389 | gnomAD-4.0.0 | 1.08029E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8462 | likely_pathogenic | 0.8299 | pathogenic | -0.62 | Destabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | I |
Y/C | 0.4007 | ambiguous | 0.3716 | ambiguous | 0.204 | Stabilizing | 1.0 | D | 0.783 | deleterious | N | 0.465759697 | None | None | I |
Y/D | 0.8264 | likely_pathogenic | 0.7939 | pathogenic | 0.957 | Stabilizing | 1.0 | D | 0.748 | deleterious | N | 0.499927064 | None | None | I |
Y/E | 0.9368 | likely_pathogenic | 0.9278 | pathogenic | 0.932 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
Y/F | 0.0985 | likely_benign | 0.0918 | benign | -0.349 | Destabilizing | 0.434 | N | 0.409 | neutral | N | 0.463492311 | None | None | I |
Y/G | 0.8599 | likely_pathogenic | 0.8421 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
Y/H | 0.4629 | ambiguous | 0.4605 | ambiguous | 0.241 | Stabilizing | 1.0 | D | 0.655 | neutral | N | 0.477329812 | None | None | I |
Y/I | 0.6831 | likely_pathogenic | 0.611 | pathogenic | -0.168 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
Y/K | 0.9425 | likely_pathogenic | 0.9254 | pathogenic | 0.329 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
Y/L | 0.7075 | likely_pathogenic | 0.682 | pathogenic | -0.168 | Destabilizing | 0.994 | D | 0.619 | neutral | None | None | None | None | I |
Y/M | 0.7788 | likely_pathogenic | 0.7258 | pathogenic | None | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
Y/N | 0.4166 | ambiguous | 0.4194 | ambiguous | 0.184 | Stabilizing | 1.0 | D | 0.749 | deleterious | N | 0.521903109 | None | None | I |
Y/P | 0.9909 | likely_pathogenic | 0.9887 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
Y/Q | 0.8823 | likely_pathogenic | 0.8668 | pathogenic | 0.199 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
Y/R | 0.8929 | likely_pathogenic | 0.8765 | pathogenic | 0.595 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
Y/S | 0.7358 | likely_pathogenic | 0.7019 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.472138799 | None | None | I |
Y/T | 0.8631 | likely_pathogenic | 0.8255 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
Y/V | 0.6512 | likely_pathogenic | 0.5792 | pathogenic | -0.299 | Destabilizing | 0.997 | D | 0.656 | neutral | None | None | None | None | I |
Y/W | 0.6266 | likely_pathogenic | 0.6085 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.