Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31097 | 93514;93515;93516 | chr2:178548337;178548336;178548335 | chr2:179413064;179413063;179413062 |
N2AB | 29456 | 88591;88592;88593 | chr2:178548337;178548336;178548335 | chr2:179413064;179413063;179413062 |
N2A | 28529 | 85810;85811;85812 | chr2:178548337;178548336;178548335 | chr2:179413064;179413063;179413062 |
N2B | 22032 | 66319;66320;66321 | chr2:178548337;178548336;178548335 | chr2:179413064;179413063;179413062 |
Novex-1 | 22157 | 66694;66695;66696 | chr2:178548337;178548336;178548335 | chr2:179413064;179413063;179413062 |
Novex-2 | 22224 | 66895;66896;66897 | chr2:178548337;178548336;178548335 | chr2:179413064;179413063;179413062 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs879219987 | -0.744 | 1.0 | D | 0.92 | 0.756 | 0.584736501517 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
G/D | rs879219987 | -0.744 | 1.0 | D | 0.92 | 0.756 | 0.584736501517 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.8107 | likely_pathogenic | 0.7682 | pathogenic | -0.578 | Destabilizing | 1.0 | D | 0.763 | deleterious | D | 0.575627719 | None | None | I |
G/C | 0.9329 | likely_pathogenic | 0.9036 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.576895167 | None | None | I |
G/D | 0.9401 | likely_pathogenic | 0.9119 | pathogenic | -0.917 | Destabilizing | 1.0 | D | 0.92 | deleterious | D | 0.565031882 | None | None | I |
G/E | 0.9721 | likely_pathogenic | 0.9526 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | I |
G/F | 0.9924 | likely_pathogenic | 0.9898 | pathogenic | -1.136 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
G/H | 0.9801 | likely_pathogenic | 0.9697 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
G/I | 0.9882 | likely_pathogenic | 0.9814 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | I |
G/K | 0.9837 | likely_pathogenic | 0.9742 | pathogenic | -1.164 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | I |
G/L | 0.9802 | likely_pathogenic | 0.9752 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
G/M | 0.9891 | likely_pathogenic | 0.9848 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
G/N | 0.9599 | likely_pathogenic | 0.9448 | pathogenic | -0.798 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | I |
G/P | 0.9981 | likely_pathogenic | 0.9976 | pathogenic | -0.536 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | I |
G/Q | 0.9676 | likely_pathogenic | 0.9502 | pathogenic | -1.095 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | I |
G/R | 0.9496 | likely_pathogenic | 0.9213 | pathogenic | -0.651 | Destabilizing | 1.0 | D | 0.918 | deleterious | D | 0.564778393 | None | None | I |
G/S | 0.6505 | likely_pathogenic | 0.5948 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.557434559 | None | None | I |
G/T | 0.9345 | likely_pathogenic | 0.9068 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | I |
G/V | 0.9772 | likely_pathogenic | 0.965 | pathogenic | -0.536 | Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.546167159 | None | None | I |
G/W | 0.9876 | likely_pathogenic | 0.9799 | pathogenic | -1.311 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
G/Y | 0.9862 | likely_pathogenic | 0.9805 | pathogenic | -0.979 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.