Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3110 | 9553;9554;9555 | chr2:178767902;178767901;178767900 | chr2:179632629;179632628;179632627 |
N2AB | 3110 | 9553;9554;9555 | chr2:178767902;178767901;178767900 | chr2:179632629;179632628;179632627 |
N2A | 3110 | 9553;9554;9555 | chr2:178767902;178767901;178767900 | chr2:179632629;179632628;179632627 |
N2B | 3064 | 9415;9416;9417 | chr2:178767902;178767901;178767900 | chr2:179632629;179632628;179632627 |
Novex-1 | 3064 | 9415;9416;9417 | chr2:178767902;178767901;178767900 | chr2:179632629;179632628;179632627 |
Novex-2 | 3064 | 9415;9416;9417 | chr2:178767902;178767901;178767900 | chr2:179632629;179632628;179632627 |
Novex-3 | 3110 | 9553;9554;9555 | chr2:178767902;178767901;178767900 | chr2:179632629;179632628;179632627 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs2090779143 | None | 0.966 | N | 0.561 | 0.531 | 0.720176921917 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/D | rs2090779143 | None | 0.966 | N | 0.561 | 0.531 | 0.720176921917 | gnomAD-4.0.0 | 2.56156E-06 | None | None | None | None | N | None | 3.38398E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8601 | likely_pathogenic | 0.8797 | pathogenic | -2.525 | Highly Destabilizing | 0.915 | D | 0.545 | neutral | None | None | None | None | N |
Y/C | 0.5418 | ambiguous | 0.6143 | pathogenic | -0.84 | Destabilizing | 0.997 | D | 0.567 | neutral | N | 0.460459436 | None | None | N |
Y/D | 0.7511 | likely_pathogenic | 0.7635 | pathogenic | -1.403 | Destabilizing | 0.966 | D | 0.561 | neutral | N | 0.463291863 | None | None | N |
Y/E | 0.9512 | likely_pathogenic | 0.955 | pathogenic | -1.332 | Destabilizing | 0.949 | D | 0.536 | neutral | None | None | None | None | N |
Y/F | 0.1148 | likely_benign | 0.1414 | benign | -1.191 | Destabilizing | 0.005 | N | 0.149 | neutral | N | 0.467379199 | None | None | N |
Y/G | 0.7656 | likely_pathogenic | 0.7677 | pathogenic | -2.84 | Highly Destabilizing | 0.915 | D | 0.533 | neutral | None | None | None | None | N |
Y/H | 0.5412 | ambiguous | 0.6006 | pathogenic | -1.316 | Destabilizing | 0.028 | N | 0.208 | neutral | N | 0.478856224 | None | None | N |
Y/I | 0.8871 | likely_pathogenic | 0.9201 | pathogenic | -1.558 | Destabilizing | 0.728 | D | 0.509 | neutral | None | None | None | None | N |
Y/K | 0.9488 | likely_pathogenic | 0.9529 | pathogenic | -1.294 | Destabilizing | 0.949 | D | 0.539 | neutral | None | None | None | None | N |
Y/L | 0.7923 | likely_pathogenic | 0.8289 | pathogenic | -1.558 | Destabilizing | 0.728 | D | 0.475 | neutral | None | None | None | None | N |
Y/M | 0.8402 | likely_pathogenic | 0.8798 | pathogenic | -1.02 | Destabilizing | 0.974 | D | 0.515 | neutral | None | None | None | None | N |
Y/N | 0.3871 | ambiguous | 0.4382 | ambiguous | -1.526 | Destabilizing | 0.934 | D | 0.556 | neutral | N | 0.438584275 | None | None | N |
Y/P | 0.9871 | likely_pathogenic | 0.9838 | pathogenic | -1.878 | Destabilizing | 0.991 | D | 0.565 | neutral | None | None | None | None | N |
Y/Q | 0.9181 | likely_pathogenic | 0.9307 | pathogenic | -1.514 | Destabilizing | 0.974 | D | 0.532 | neutral | None | None | None | None | N |
Y/R | 0.8989 | likely_pathogenic | 0.9035 | pathogenic | -0.767 | Destabilizing | 0.949 | D | 0.573 | neutral | None | None | None | None | N |
Y/S | 0.6466 | likely_pathogenic | 0.6961 | pathogenic | -1.987 | Destabilizing | 0.891 | D | 0.543 | neutral | N | 0.470240812 | None | None | N |
Y/T | 0.8407 | likely_pathogenic | 0.8642 | pathogenic | -1.827 | Destabilizing | 0.974 | D | 0.537 | neutral | None | None | None | None | N |
Y/V | 0.8104 | likely_pathogenic | 0.8468 | pathogenic | -1.878 | Destabilizing | 0.842 | D | 0.499 | neutral | None | None | None | None | N |
Y/W | 0.6646 | likely_pathogenic | 0.6924 | pathogenic | -0.816 | Destabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.