Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31100 | 93523;93524;93525 | chr2:178548328;178548327;178548326 | chr2:179413055;179413054;179413053 |
N2AB | 29459 | 88600;88601;88602 | chr2:178548328;178548327;178548326 | chr2:179413055;179413054;179413053 |
N2A | 28532 | 85819;85820;85821 | chr2:178548328;178548327;178548326 | chr2:179413055;179413054;179413053 |
N2B | 22035 | 66328;66329;66330 | chr2:178548328;178548327;178548326 | chr2:179413055;179413054;179413053 |
Novex-1 | 22160 | 66703;66704;66705 | chr2:178548328;178548327;178548326 | chr2:179413055;179413054;179413053 |
Novex-2 | 22227 | 66904;66905;66906 | chr2:178548328;178548327;178548326 | chr2:179413055;179413054;179413053 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.677 | 0.384 | 0.351830644314 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1976 | likely_benign | 0.195 | benign | -0.615 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | N | 0.468241686 | None | None | I |
E/C | 0.8162 | likely_pathogenic | 0.826 | pathogenic | -0.049 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
E/D | 0.1336 | likely_benign | 0.1386 | benign | -0.593 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.487062604 | None | None | I |
E/F | 0.744 | likely_pathogenic | 0.7077 | pathogenic | -0.573 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/G | 0.3099 | likely_benign | 0.2862 | benign | -0.834 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.513324513 | None | None | I |
E/H | 0.5979 | likely_pathogenic | 0.5413 | ambiguous | -0.56 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | I |
E/I | 0.2418 | likely_benign | 0.2253 | benign | -0.064 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
E/K | 0.2509 | likely_benign | 0.1923 | benign | 0.115 | Stabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.518057514 | None | None | I |
E/L | 0.321 | likely_benign | 0.2918 | benign | -0.064 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
E/M | 0.3857 | ambiguous | 0.3639 | ambiguous | 0.238 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/N | 0.3112 | likely_benign | 0.2972 | benign | -0.17 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/P | 0.6453 | likely_pathogenic | 0.637 | pathogenic | -0.228 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
E/Q | 0.1691 | likely_benign | 0.1547 | benign | -0.155 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.477876471 | None | None | I |
E/R | 0.4194 | ambiguous | 0.3486 | ambiguous | 0.256 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/S | 0.2517 | likely_benign | 0.2427 | benign | -0.349 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | I |
E/T | 0.2665 | likely_benign | 0.2557 | benign | -0.175 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
E/V | 0.1475 | likely_benign | 0.1389 | benign | -0.228 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.494951368 | None | None | I |
E/W | 0.9386 | likely_pathogenic | 0.9268 | pathogenic | -0.416 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
E/Y | 0.652 | likely_pathogenic | 0.6224 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.