Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31101 | 93526;93527;93528 | chr2:178548325;178548324;178548323 | chr2:179413052;179413051;179413050 |
N2AB | 29460 | 88603;88604;88605 | chr2:178548325;178548324;178548323 | chr2:179413052;179413051;179413050 |
N2A | 28533 | 85822;85823;85824 | chr2:178548325;178548324;178548323 | chr2:179413052;179413051;179413050 |
N2B | 22036 | 66331;66332;66333 | chr2:178548325;178548324;178548323 | chr2:179413052;179413051;179413050 |
Novex-1 | 22161 | 66706;66707;66708 | chr2:178548325;178548324;178548323 | chr2:179413052;179413051;179413050 |
Novex-2 | 22228 | 66907;66908;66909 | chr2:178548325;178548324;178548323 | chr2:179413052;179413051;179413050 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.999 | D | 0.68 | 0.38 | 0.503002171853 | gnomAD-4.0.0 | 2.05257E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79889E-06 | 0 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0847 | likely_benign | 0.0734 | benign | -1.601 | Destabilizing | 0.767 | D | 0.353 | neutral | N | 0.471645046 | None | None | I |
P/C | 0.4524 | ambiguous | 0.4453 | ambiguous | -1.065 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | I |
P/D | 0.7694 | likely_pathogenic | 0.7013 | pathogenic | -1.63 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/E | 0.6457 | likely_pathogenic | 0.5934 | pathogenic | -1.656 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
P/F | 0.5049 | ambiguous | 0.5017 | ambiguous | -1.292 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
P/G | 0.3327 | likely_benign | 0.2966 | benign | -1.881 | Destabilizing | 0.997 | D | 0.606 | neutral | None | None | None | None | I |
P/H | 0.3679 | ambiguous | 0.3616 | ambiguous | -1.342 | Destabilizing | 1.0 | D | 0.787 | deleterious | D | 0.550382397 | None | None | I |
P/I | 0.4531 | ambiguous | 0.4158 | ambiguous | -0.935 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
P/K | 0.6859 | likely_pathogenic | 0.6298 | pathogenic | -1.33 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
P/L | 0.2635 | likely_benign | 0.2244 | benign | -0.935 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | D | 0.525223796 | None | None | I |
P/M | 0.4226 | ambiguous | 0.4128 | ambiguous | -0.717 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
P/N | 0.5191 | ambiguous | 0.4814 | ambiguous | -1.099 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
P/Q | 0.3756 | ambiguous | 0.3627 | ambiguous | -1.348 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
P/R | 0.507 | ambiguous | 0.4616 | ambiguous | -0.71 | Destabilizing | 0.999 | D | 0.768 | deleterious | N | 0.519907878 | None | None | I |
P/S | 0.1771 | likely_benign | 0.1532 | benign | -1.561 | Destabilizing | 0.992 | D | 0.581 | neutral | N | 0.509107777 | None | None | I |
P/T | 0.1736 | likely_benign | 0.1594 | benign | -1.493 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | D | 0.531517673 | None | None | I |
P/V | 0.3104 | likely_benign | 0.2862 | benign | -1.124 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | I |
P/W | 0.7504 | likely_pathogenic | 0.7146 | pathogenic | -1.418 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
P/Y | 0.5249 | ambiguous | 0.4986 | ambiguous | -1.173 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.