Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31105 | 93538;93539;93540 | chr2:178548313;178548312;178548311 | chr2:179413040;179413039;179413038 |
N2AB | 29464 | 88615;88616;88617 | chr2:178548313;178548312;178548311 | chr2:179413040;179413039;179413038 |
N2A | 28537 | 85834;85835;85836 | chr2:178548313;178548312;178548311 | chr2:179413040;179413039;179413038 |
N2B | 22040 | 66343;66344;66345 | chr2:178548313;178548312;178548311 | chr2:179413040;179413039;179413038 |
Novex-1 | 22165 | 66718;66719;66720 | chr2:178548313;178548312;178548311 | chr2:179413040;179413039;179413038 |
Novex-2 | 22232 | 66919;66920;66921 | chr2:178548313;178548312;178548311 | chr2:179413040;179413039;179413038 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.01 | N | 0.201 | 0.098 | 0.191931220699 | gnomAD-4.0.0 | 1.59118E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0545 | likely_benign | 0.0678 | benign | -0.731 | Destabilizing | 0.278 | N | 0.316 | neutral | N | 0.422178832 | None | None | I |
P/C | 0.3171 | likely_benign | 0.4304 | ambiguous | -0.497 | Destabilizing | 0.995 | D | 0.629 | neutral | None | None | None | None | I |
P/D | 0.2583 | likely_benign | 0.2953 | benign | -0.925 | Destabilizing | 0.712 | D | 0.465 | neutral | None | None | None | None | I |
P/E | 0.1766 | likely_benign | 0.1976 | benign | -0.968 | Destabilizing | 0.553 | D | 0.412 | neutral | None | None | None | None | I |
P/F | 0.3246 | likely_benign | 0.4275 | ambiguous | -0.759 | Destabilizing | 0.946 | D | 0.637 | neutral | None | None | None | None | I |
P/G | 0.1691 | likely_benign | 0.2079 | benign | -0.912 | Destabilizing | 0.712 | D | 0.438 | neutral | None | None | None | None | I |
P/H | 0.1547 | likely_benign | 0.1936 | benign | -0.369 | Destabilizing | 0.985 | D | 0.551 | neutral | None | None | None | None | I |
P/I | 0.1672 | likely_benign | 0.2305 | benign | -0.355 | Destabilizing | 0.897 | D | 0.676 | prob.neutral | None | None | None | None | I |
P/K | 0.182 | likely_benign | 0.2118 | benign | -0.615 | Destabilizing | 0.553 | D | 0.333 | neutral | None | None | None | None | I |
P/L | 0.0791 | likely_benign | 0.0983 | benign | -0.355 | Destabilizing | 0.483 | N | 0.503 | neutral | N | 0.487150243 | None | None | I |
P/M | 0.1502 | likely_benign | 0.2007 | benign | -0.527 | Destabilizing | 0.995 | D | 0.544 | neutral | None | None | None | None | I |
P/N | 0.1633 | likely_benign | 0.2237 | benign | -0.405 | Destabilizing | 0.897 | D | 0.565 | neutral | None | None | None | None | I |
P/Q | 0.1113 | likely_benign | 0.135 | benign | -0.603 | Destabilizing | 0.055 | N | 0.261 | neutral | N | 0.463639195 | None | None | I |
P/R | 0.1531 | likely_benign | 0.1696 | benign | -0.115 | Destabilizing | 0.766 | D | 0.56 | neutral | N | 0.467932551 | None | None | I |
P/S | 0.0849 | likely_benign | 0.1074 | benign | -0.694 | Destabilizing | 0.483 | N | 0.385 | neutral | N | 0.361957092 | None | None | I |
P/T | 0.0661 | likely_benign | 0.0821 | benign | -0.645 | Destabilizing | 0.01 | N | 0.201 | neutral | N | 0.39732046 | None | None | I |
P/V | 0.115 | likely_benign | 0.1479 | benign | -0.45 | Destabilizing | 0.553 | D | 0.435 | neutral | None | None | None | None | I |
P/W | 0.4976 | ambiguous | 0.5769 | pathogenic | -0.891 | Destabilizing | 0.995 | D | 0.687 | prob.delet. | None | None | None | None | I |
P/Y | 0.3233 | likely_benign | 0.4084 | ambiguous | -0.588 | Destabilizing | 0.982 | D | 0.632 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.