Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31111 | 93556;93557;93558 | chr2:178548295;178548294;178548293 | chr2:179413022;179413021;179413020 |
N2AB | 29470 | 88633;88634;88635 | chr2:178548295;178548294;178548293 | chr2:179413022;179413021;179413020 |
N2A | 28543 | 85852;85853;85854 | chr2:178548295;178548294;178548293 | chr2:179413022;179413021;179413020 |
N2B | 22046 | 66361;66362;66363 | chr2:178548295;178548294;178548293 | chr2:179413022;179413021;179413020 |
Novex-1 | 22171 | 66736;66737;66738 | chr2:178548295;178548294;178548293 | chr2:179413022;179413021;179413020 |
Novex-2 | 22238 | 66937;66938;66939 | chr2:178548295;178548294;178548293 | chr2:179413022;179413021;179413020 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.997 | N | 0.48 | 0.329 | 0.171388866994 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1265 | likely_benign | 0.119 | benign | -0.388 | Destabilizing | 0.997 | D | 0.48 | neutral | N | 0.399803405 | None | None | N |
T/C | 0.6114 | likely_pathogenic | 0.6329 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/D | 0.8913 | likely_pathogenic | 0.8566 | pathogenic | 0.227 | Stabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/E | 0.7664 | likely_pathogenic | 0.7126 | pathogenic | 0.152 | Stabilizing | 0.999 | D | 0.689 | prob.delet. | None | None | None | None | N |
T/F | 0.7937 | likely_pathogenic | 0.7554 | pathogenic | -0.87 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
T/G | 0.4056 | ambiguous | 0.3822 | ambiguous | -0.511 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
T/H | 0.7461 | likely_pathogenic | 0.691 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.657 | prob.neutral | None | None | None | None | N |
T/I | 0.64 | likely_pathogenic | 0.619 | pathogenic | -0.183 | Destabilizing | 0.999 | D | 0.665 | prob.neutral | N | 0.459851786 | None | None | N |
T/K | 0.5136 | ambiguous | 0.3999 | ambiguous | -0.413 | Destabilizing | 0.999 | D | 0.69 | prob.delet. | N | 0.40434522 | None | None | N |
T/L | 0.2969 | likely_benign | 0.2788 | benign | -0.183 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
T/M | 0.1628 | likely_benign | 0.1611 | benign | -0.073 | Destabilizing | 1.0 | D | 0.657 | prob.neutral | None | None | None | None | N |
T/N | 0.4968 | ambiguous | 0.4286 | ambiguous | -0.237 | Destabilizing | 0.999 | D | 0.705 | prob.delet. | None | None | None | None | N |
T/P | 0.7908 | likely_pathogenic | 0.7231 | pathogenic | -0.223 | Destabilizing | 0.999 | D | 0.623 | neutral | N | 0.434259908 | None | None | N |
T/Q | 0.5093 | ambiguous | 0.4569 | ambiguous | -0.452 | Destabilizing | 0.999 | D | 0.673 | prob.neutral | None | None | None | None | N |
T/R | 0.4126 | ambiguous | 0.3211 | benign | -0.17 | Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.431723822 | None | None | N |
T/S | 0.194 | likely_benign | 0.18 | benign | -0.451 | Destabilizing | 0.997 | D | 0.547 | neutral | N | 0.390279844 | None | None | N |
T/V | 0.3362 | likely_benign | 0.3373 | benign | -0.223 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
T/W | 0.9434 | likely_pathogenic | 0.9334 | pathogenic | -0.867 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
T/Y | 0.8575 | likely_pathogenic | 0.8116 | pathogenic | -0.589 | Destabilizing | 1.0 | D | 0.654 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.