Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31112 | 93559;93560;93561 | chr2:178548292;178548291;178548290 | chr2:179413019;179413018;179413017 |
N2AB | 29471 | 88636;88637;88638 | chr2:178548292;178548291;178548290 | chr2:179413019;179413018;179413017 |
N2A | 28544 | 85855;85856;85857 | chr2:178548292;178548291;178548290 | chr2:179413019;179413018;179413017 |
N2B | 22047 | 66364;66365;66366 | chr2:178548292;178548291;178548290 | chr2:179413019;179413018;179413017 |
Novex-1 | 22172 | 66739;66740;66741 | chr2:178548292;178548291;178548290 | chr2:179413019;179413018;179413017 |
Novex-2 | 22239 | 66940;66941;66942 | chr2:178548292;178548291;178548290 | chr2:179413019;179413018;179413017 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.997 | N | 0.531 | 0.088 | 0.211220785272 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs367766603 | 0.676 | 0.997 | N | 0.684 | 0.308 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/K | rs367766603 | 0.676 | 0.997 | N | 0.684 | 0.308 | None | gnomAD-4.0.0 | 1.36835E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79888E-06 | 0 | 0 |
E/Q | None | None | 0.999 | N | 0.637 | 0.208 | 0.220303561663 | gnomAD-4.0.0 | 6.84177E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99439E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3845 | ambiguous | 0.2414 | benign | -0.161 | Destabilizing | 0.997 | D | 0.737 | deleterious | N | 0.493385569 | None | None | N |
E/C | 0.9647 | likely_pathogenic | 0.9384 | pathogenic | 0.042 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/D | 0.5372 | ambiguous | 0.4361 | ambiguous | -0.314 | Destabilizing | 0.997 | D | 0.531 | neutral | N | 0.465873681 | None | None | N |
E/F | 0.9789 | likely_pathogenic | 0.9504 | pathogenic | -0.212 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/G | 0.4821 | ambiguous | 0.3193 | benign | -0.308 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.50760566 | None | None | N |
E/H | 0.9131 | likely_pathogenic | 0.8218 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
E/I | 0.8952 | likely_pathogenic | 0.7859 | pathogenic | 0.175 | Stabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
E/K | 0.5909 | likely_pathogenic | 0.3817 | ambiguous | 0.485 | Stabilizing | 0.997 | D | 0.684 | prob.delet. | N | 0.516803934 | None | None | N |
E/L | 0.8683 | likely_pathogenic | 0.7338 | pathogenic | 0.175 | Stabilizing | 0.999 | D | 0.699 | prob.delet. | None | None | None | None | N |
E/M | 0.8419 | likely_pathogenic | 0.7 | pathogenic | 0.154 | Stabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/N | 0.7757 | likely_pathogenic | 0.648 | pathogenic | 0.25 | Stabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
E/P | 0.9926 | likely_pathogenic | 0.9853 | pathogenic | 0.082 | Stabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
E/Q | 0.2912 | likely_benign | 0.1848 | benign | 0.257 | Stabilizing | 0.999 | D | 0.637 | neutral | N | 0.472898441 | None | None | N |
E/R | 0.7073 | likely_pathogenic | 0.511 | ambiguous | 0.625 | Stabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
E/S | 0.5029 | ambiguous | 0.3409 | ambiguous | 0.12 | Stabilizing | 0.998 | D | 0.738 | deleterious | None | None | None | None | N |
E/T | 0.6789 | likely_pathogenic | 0.4812 | ambiguous | 0.24 | Stabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
E/V | 0.721 | likely_pathogenic | 0.5287 | ambiguous | 0.082 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.476618569 | None | None | N |
E/W | 0.9948 | likely_pathogenic | 0.9871 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/Y | 0.9628 | likely_pathogenic | 0.9219 | pathogenic | 0.018 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.