Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31113 | 93562;93563;93564 | chr2:178548289;178548288;178548287 | chr2:179413016;179413015;179413014 |
N2AB | 29472 | 88639;88640;88641 | chr2:178548289;178548288;178548287 | chr2:179413016;179413015;179413014 |
N2A | 28545 | 85858;85859;85860 | chr2:178548289;178548288;178548287 | chr2:179413016;179413015;179413014 |
N2B | 22048 | 66367;66368;66369 | chr2:178548289;178548288;178548287 | chr2:179413016;179413015;179413014 |
Novex-1 | 22173 | 66742;66743;66744 | chr2:178548289;178548288;178548287 | chr2:179413016;179413015;179413014 |
Novex-2 | 22240 | 66943;66944;66945 | chr2:178548289;178548288;178548287 | chr2:179413016;179413015;179413014 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.412 | N | 0.306 | 0.039 | 0.132336055621 | gnomAD-4.0.0 | 1.59111E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1442 | likely_benign | 0.1391 | benign | -0.298 | Destabilizing | 0.026 | N | 0.361 | neutral | None | None | None | None | N |
Q/C | 0.586 | likely_pathogenic | 0.6201 | pathogenic | 0.346 | Stabilizing | 0.914 | D | 0.412 | neutral | None | None | None | None | N |
Q/D | 0.5294 | ambiguous | 0.5208 | ambiguous | -0.236 | Destabilizing | 0.012 | N | 0.259 | neutral | None | None | None | None | N |
Q/E | 0.082 | likely_benign | 0.0774 | benign | -0.268 | Destabilizing | None | N | 0.044 | neutral | N | 0.372598161 | None | None | N |
Q/F | 0.689 | likely_pathogenic | 0.686 | pathogenic | -0.539 | Destabilizing | 0.739 | D | 0.517 | neutral | None | None | None | None | N |
Q/G | 0.341 | ambiguous | 0.3254 | benign | -0.493 | Destabilizing | 0.051 | N | 0.351 | neutral | None | None | None | None | N |
Q/H | 0.3316 | likely_benign | 0.3273 | benign | -0.581 | Destabilizing | 0.412 | N | 0.306 | neutral | N | 0.477880186 | None | None | N |
Q/I | 0.261 | likely_benign | 0.2431 | benign | 0.134 | Stabilizing | 0.482 | N | 0.528 | neutral | None | None | None | None | N |
Q/K | 0.0997 | likely_benign | 0.0854 | benign | 0.129 | Stabilizing | 0.009 | N | 0.279 | neutral | N | 0.393434793 | None | None | N |
Q/L | 0.1256 | likely_benign | 0.1206 | benign | 0.134 | Stabilizing | 0.09 | N | 0.401 | neutral | N | 0.405382583 | None | None | N |
Q/M | 0.2678 | likely_benign | 0.2622 | benign | 0.677 | Stabilizing | 0.739 | D | 0.343 | neutral | None | None | None | None | N |
Q/N | 0.3722 | ambiguous | 0.3607 | ambiguous | -0.138 | Destabilizing | 0.116 | N | 0.218 | neutral | None | None | None | None | N |
Q/P | 0.0928 | likely_benign | 0.089 | benign | 0.018 | Stabilizing | 0.167 | N | 0.489 | neutral | N | 0.348835866 | None | None | N |
Q/R | 0.1371 | likely_benign | 0.1254 | benign | 0.286 | Stabilizing | 0.039 | N | 0.307 | neutral | N | 0.4148875 | None | None | N |
Q/S | 0.246 | likely_benign | 0.2365 | benign | -0.165 | Destabilizing | 0.026 | N | 0.247 | neutral | None | None | None | None | N |
Q/T | 0.1888 | likely_benign | 0.1751 | benign | -0.043 | Destabilizing | 0.116 | N | 0.411 | neutral | None | None | None | None | N |
Q/V | 0.1602 | likely_benign | 0.147 | benign | 0.018 | Stabilizing | 0.116 | N | 0.472 | neutral | None | None | None | None | N |
Q/W | 0.7329 | likely_pathogenic | 0.7016 | pathogenic | -0.481 | Destabilizing | 0.914 | D | 0.439 | neutral | None | None | None | None | N |
Q/Y | 0.5408 | ambiguous | 0.5289 | ambiguous | -0.219 | Destabilizing | 0.739 | D | 0.487 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.