Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31127 | 93604;93605;93606 | chr2:178548247;178548246;178548245 | chr2:179412974;179412973;179412972 |
N2AB | 29486 | 88681;88682;88683 | chr2:178548247;178548246;178548245 | chr2:179412974;179412973;179412972 |
N2A | 28559 | 85900;85901;85902 | chr2:178548247;178548246;178548245 | chr2:179412974;179412973;179412972 |
N2B | 22062 | 66409;66410;66411 | chr2:178548247;178548246;178548245 | chr2:179412974;179412973;179412972 |
Novex-1 | 22187 | 66784;66785;66786 | chr2:178548247;178548246;178548245 | chr2:179412974;179412973;179412972 |
Novex-2 | 22254 | 66985;66986;66987 | chr2:178548247;178548246;178548245 | chr2:179412974;179412973;179412972 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1172489914 | -0.007 | 0.006 | N | 0.202 | 0.074 | 0.224531998449 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1172489914 | -0.007 | 0.006 | N | 0.202 | 0.074 | 0.224531998449 | gnomAD-4.0.0 | 1.5911E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1991 | likely_benign | 0.2025 | benign | -0.074 | Destabilizing | 0.329 | N | 0.457 | neutral | None | None | None | None | N |
K/C | 0.5239 | ambiguous | 0.5861 | pathogenic | -0.216 | Destabilizing | 0.995 | D | 0.497 | neutral | None | None | None | None | N |
K/D | 0.3808 | ambiguous | 0.3888 | ambiguous | 0.189 | Stabilizing | 0.007 | N | 0.189 | neutral | None | None | None | None | N |
K/E | 0.1714 | likely_benign | 0.1644 | benign | 0.183 | Stabilizing | 0.27 | N | 0.39 | neutral | N | 0.501989197 | None | None | N |
K/F | 0.6777 | likely_pathogenic | 0.6937 | pathogenic | -0.387 | Destabilizing | 0.981 | D | 0.531 | neutral | None | None | None | None | N |
K/G | 0.2617 | likely_benign | 0.2737 | benign | -0.256 | Destabilizing | 0.495 | N | 0.504 | neutral | None | None | None | None | N |
K/H | 0.2401 | likely_benign | 0.2705 | benign | -0.609 | Destabilizing | 0.944 | D | 0.456 | neutral | None | None | None | None | N |
K/I | 0.3456 | ambiguous | 0.357 | ambiguous | 0.322 | Stabilizing | 0.927 | D | 0.551 | neutral | N | 0.50027314 | None | None | N |
K/L | 0.3135 | likely_benign | 0.3105 | benign | 0.322 | Stabilizing | 0.704 | D | 0.496 | neutral | None | None | None | None | N |
K/M | 0.2459 | likely_benign | 0.2438 | benign | 0.3 | Stabilizing | 0.981 | D | 0.445 | neutral | None | None | None | None | N |
K/N | 0.2751 | likely_benign | 0.2917 | benign | 0.316 | Stabilizing | 0.01 | N | 0.068 | neutral | N | 0.509475316 | None | None | N |
K/P | 0.3724 | ambiguous | 0.3549 | ambiguous | 0.217 | Stabilizing | 0.944 | D | 0.476 | neutral | None | None | None | None | N |
K/Q | 0.115 | likely_benign | 0.122 | benign | 0.066 | Stabilizing | 0.642 | D | 0.401 | neutral | N | 0.475229898 | None | None | N |
K/R | 0.0699 | likely_benign | 0.0741 | benign | 0.075 | Stabilizing | 0.006 | N | 0.202 | neutral | N | 0.497239525 | None | None | N |
K/S | 0.2353 | likely_benign | 0.2426 | benign | -0.246 | Destabilizing | 0.037 | N | 0.066 | neutral | None | None | None | None | N |
K/T | 0.1624 | likely_benign | 0.1614 | benign | -0.105 | Destabilizing | 0.473 | N | 0.428 | neutral | N | 0.469745715 | None | None | N |
K/V | 0.2896 | likely_benign | 0.2917 | benign | 0.217 | Stabilizing | 0.828 | D | 0.503 | neutral | None | None | None | None | N |
K/W | 0.7102 | likely_pathogenic | 0.7353 | pathogenic | -0.349 | Destabilizing | 0.995 | D | 0.627 | neutral | None | None | None | None | N |
K/Y | 0.5132 | ambiguous | 0.5479 | ambiguous | 0.024 | Stabilizing | 0.981 | D | 0.501 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.