Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31129 | 93610;93611;93612 | chr2:178548241;178548240;178548239 | chr2:179412968;179412967;179412966 |
N2AB | 29488 | 88687;88688;88689 | chr2:178548241;178548240;178548239 | chr2:179412968;179412967;179412966 |
N2A | 28561 | 85906;85907;85908 | chr2:178548241;178548240;178548239 | chr2:179412968;179412967;179412966 |
N2B | 22064 | 66415;66416;66417 | chr2:178548241;178548240;178548239 | chr2:179412968;179412967;179412966 |
Novex-1 | 22189 | 66790;66791;66792 | chr2:178548241;178548240;178548239 | chr2:179412968;179412967;179412966 |
Novex-2 | 22256 | 66991;66992;66993 | chr2:178548241;178548240;178548239 | chr2:179412968;179412967;179412966 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.896 | N | 0.654 | 0.372 | 0.635364320139 | gnomAD-4.0.0 | 2.73673E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59779E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1003 | likely_benign | 0.1148 | benign | -0.66 | Destabilizing | 0.099 | N | 0.368 | neutral | N | 0.476304125 | None | None | N |
S/C | 0.1177 | likely_benign | 0.1264 | benign | -0.869 | Destabilizing | 0.009 | N | 0.353 | neutral | N | 0.483269566 | None | None | N |
S/D | 0.659 | likely_pathogenic | 0.6472 | pathogenic | -1.377 | Destabilizing | 0.617 | D | 0.521 | neutral | None | None | None | None | N |
S/E | 0.6675 | likely_pathogenic | 0.6582 | pathogenic | -1.356 | Destabilizing | 0.617 | D | 0.522 | neutral | None | None | None | None | N |
S/F | 0.1994 | likely_benign | 0.23 | benign | -1.131 | Destabilizing | 0.896 | D | 0.654 | neutral | N | 0.482193155 | None | None | N |
S/G | 0.1467 | likely_benign | 0.1482 | benign | -0.864 | Destabilizing | 0.617 | D | 0.475 | neutral | None | None | None | None | N |
S/H | 0.3892 | ambiguous | 0.3895 | ambiguous | -1.384 | Destabilizing | 0.992 | D | 0.587 | neutral | None | None | None | None | N |
S/I | 0.3205 | likely_benign | 0.3711 | ambiguous | -0.22 | Destabilizing | 0.85 | D | 0.63 | neutral | None | None | None | None | N |
S/K | 0.7524 | likely_pathogenic | 0.7484 | pathogenic | -0.573 | Destabilizing | 0.617 | D | 0.515 | neutral | None | None | None | None | N |
S/L | 0.1443 | likely_benign | 0.1583 | benign | -0.22 | Destabilizing | 0.447 | N | 0.533 | neutral | None | None | None | None | N |
S/M | 0.2122 | likely_benign | 0.2409 | benign | 0.066 | Stabilizing | 0.92 | D | 0.599 | neutral | None | None | None | None | N |
S/N | 0.2729 | likely_benign | 0.2926 | benign | -0.848 | Destabilizing | 0.617 | D | 0.543 | neutral | None | None | None | None | N |
S/P | 0.9683 | likely_pathogenic | 0.9656 | pathogenic | -0.337 | Destabilizing | 0.896 | D | 0.631 | neutral | N | 0.520870427 | None | None | N |
S/Q | 0.5809 | likely_pathogenic | 0.5807 | pathogenic | -1.119 | Destabilizing | 0.92 | D | 0.573 | neutral | None | None | None | None | N |
S/R | 0.6751 | likely_pathogenic | 0.6711 | pathogenic | -0.41 | Destabilizing | 0.85 | D | 0.633 | neutral | None | None | None | None | N |
S/T | 0.0749 | likely_benign | 0.0762 | benign | -0.71 | Destabilizing | 0.001 | N | 0.137 | neutral | N | 0.451184735 | None | None | N |
S/V | 0.2637 | likely_benign | 0.2966 | benign | -0.337 | Destabilizing | 0.447 | N | 0.535 | neutral | None | None | None | None | N |
S/W | 0.4124 | ambiguous | 0.4057 | ambiguous | -1.176 | Destabilizing | 0.992 | D | 0.665 | neutral | None | None | None | None | N |
S/Y | 0.22 | likely_benign | 0.2364 | benign | -0.801 | Destabilizing | 0.963 | D | 0.647 | neutral | N | 0.47969794 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.