Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31135 | 93628;93629;93630 | chr2:178548223;178548222;178548221 | chr2:179412950;179412949;179412948 |
N2AB | 29494 | 88705;88706;88707 | chr2:178548223;178548222;178548221 | chr2:179412950;179412949;179412948 |
N2A | 28567 | 85924;85925;85926 | chr2:178548223;178548222;178548221 | chr2:179412950;179412949;179412948 |
N2B | 22070 | 66433;66434;66435 | chr2:178548223;178548222;178548221 | chr2:179412950;179412949;179412948 |
Novex-1 | 22195 | 66808;66809;66810 | chr2:178548223;178548222;178548221 | chr2:179412950;179412949;179412948 |
Novex-2 | 22262 | 67009;67010;67011 | chr2:178548223;178548222;178548221 | chr2:179412950;179412949;179412948 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1284369744 | -1.08 | 1.0 | N | 0.823 | 0.498 | 0.68219128047 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
L/P | rs1284369744 | -1.08 | 1.0 | N | 0.823 | 0.498 | 0.68219128047 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs1284369744 | -1.08 | 1.0 | N | 0.823 | 0.498 | 0.68219128047 | gnomAD-4.0.0 | 2.56197E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78577E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2418 | likely_benign | 0.2751 | benign | -2.004 | Highly Destabilizing | 0.994 | D | 0.715 | prob.delet. | None | None | None | None | I |
L/C | 0.5245 | ambiguous | 0.5316 | ambiguous | -1.04 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
L/D | 0.6484 | likely_pathogenic | 0.6395 | pathogenic | -1.765 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
L/E | 0.274 | likely_benign | 0.2466 | benign | -1.7 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
L/F | 0.1985 | likely_benign | 0.2128 | benign | -1.297 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | N | 0.515363926 | None | None | I |
L/G | 0.4344 | ambiguous | 0.4447 | ambiguous | -2.385 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | I |
L/H | 0.2765 | likely_benign | 0.2684 | benign | -1.539 | Destabilizing | 1.0 | D | 0.816 | deleterious | N | 0.496604807 | None | None | I |
L/I | 0.1253 | likely_benign | 0.1423 | benign | -0.989 | Destabilizing | 0.984 | D | 0.504 | neutral | N | 0.460068003 | None | None | I |
L/K | 0.2927 | likely_benign | 0.253 | benign | -1.528 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
L/M | 0.0984 | likely_benign | 0.102 | benign | -0.664 | Destabilizing | 0.971 | D | 0.39 | neutral | None | None | None | None | I |
L/N | 0.3051 | likely_benign | 0.3259 | benign | -1.44 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
L/P | 0.6046 | likely_pathogenic | 0.6228 | pathogenic | -1.3 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.45593162 | None | None | I |
L/Q | 0.1101 | likely_benign | 0.0997 | benign | -1.562 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | I |
L/R | 0.2731 | likely_benign | 0.243 | benign | -0.884 | Destabilizing | 0.999 | D | 0.812 | deleterious | N | 0.438807297 | None | None | I |
L/S | 0.2399 | likely_benign | 0.2653 | benign | -2.04 | Highly Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
L/T | 0.1958 | likely_benign | 0.2157 | benign | -1.862 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | I |
L/V | 0.1058 | likely_benign | 0.1179 | benign | -1.3 | Destabilizing | 0.984 | D | 0.528 | neutral | N | 0.447946855 | None | None | I |
L/W | 0.3778 | ambiguous | 0.3589 | ambiguous | -1.473 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
L/Y | 0.4152 | ambiguous | 0.4214 | ambiguous | -1.252 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.