Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3113593628;93629;93630 chr2:178548223;178548222;178548221chr2:179412950;179412949;179412948
N2AB2949488705;88706;88707 chr2:178548223;178548222;178548221chr2:179412950;179412949;179412948
N2A2856785924;85925;85926 chr2:178548223;178548222;178548221chr2:179412950;179412949;179412948
N2B2207066433;66434;66435 chr2:178548223;178548222;178548221chr2:179412950;179412949;179412948
Novex-12219566808;66809;66810 chr2:178548223;178548222;178548221chr2:179412950;179412949;179412948
Novex-22226267009;67010;67011 chr2:178548223;178548222;178548221chr2:179412950;179412949;179412948
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-115
  • Domain position: 23
  • Structural Position: 25
  • Q(SASA): 0.6508
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs1284369744 -1.08 1.0 N 0.823 0.498 0.68219128047 gnomAD-2.1.1 3.19E-05 None None None None I None 0 0 None 0 0 None 0 None 0 6.49E-05 0
L/P rs1284369744 -1.08 1.0 N 0.823 0.498 0.68219128047 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/P rs1284369744 -1.08 1.0 N 0.823 0.498 0.68219128047 gnomAD-4.0.0 2.56197E-06 None None None None I None 0 0 None 0 0 None 0 0 4.78577E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2418 likely_benign 0.2751 benign -2.004 Highly Destabilizing 0.994 D 0.715 prob.delet. None None None None I
L/C 0.5245 ambiguous 0.5316 ambiguous -1.04 Destabilizing 1.0 D 0.773 deleterious None None None None I
L/D 0.6484 likely_pathogenic 0.6395 pathogenic -1.765 Destabilizing 1.0 D 0.822 deleterious None None None None I
L/E 0.274 likely_benign 0.2466 benign -1.7 Destabilizing 1.0 D 0.813 deleterious None None None None I
L/F 0.1985 likely_benign 0.2128 benign -1.297 Destabilizing 0.998 D 0.712 prob.delet. N 0.515363926 None None I
L/G 0.4344 ambiguous 0.4447 ambiguous -2.385 Highly Destabilizing 0.999 D 0.809 deleterious None None None None I
L/H 0.2765 likely_benign 0.2684 benign -1.539 Destabilizing 1.0 D 0.816 deleterious N 0.496604807 None None I
L/I 0.1253 likely_benign 0.1423 benign -0.989 Destabilizing 0.984 D 0.504 neutral N 0.460068003 None None I
L/K 0.2927 likely_benign 0.253 benign -1.528 Destabilizing 0.999 D 0.799 deleterious None None None None I
L/M 0.0984 likely_benign 0.102 benign -0.664 Destabilizing 0.971 D 0.39 neutral None None None None I
L/N 0.3051 likely_benign 0.3259 benign -1.44 Destabilizing 1.0 D 0.823 deleterious None None None None I
L/P 0.6046 likely_pathogenic 0.6228 pathogenic -1.3 Destabilizing 1.0 D 0.823 deleterious N 0.45593162 None None I
L/Q 0.1101 likely_benign 0.0997 benign -1.562 Destabilizing 0.999 D 0.813 deleterious None None None None I
L/R 0.2731 likely_benign 0.243 benign -0.884 Destabilizing 0.999 D 0.812 deleterious N 0.438807297 None None I
L/S 0.2399 likely_benign 0.2653 benign -2.04 Highly Destabilizing 0.999 D 0.783 deleterious None None None None I
L/T 0.1958 likely_benign 0.2157 benign -1.862 Destabilizing 0.999 D 0.779 deleterious None None None None I
L/V 0.1058 likely_benign 0.1179 benign -1.3 Destabilizing 0.984 D 0.528 neutral N 0.447946855 None None I
L/W 0.3778 ambiguous 0.3589 ambiguous -1.473 Destabilizing 1.0 D 0.815 deleterious None None None None I
L/Y 0.4152 ambiguous 0.4214 ambiguous -1.252 Destabilizing 1.0 D 0.817 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.