Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31147 | 93664;93665;93666 | chr2:178548187;178548186;178548185 | chr2:179412914;179412913;179412912 |
N2AB | 29506 | 88741;88742;88743 | chr2:178548187;178548186;178548185 | chr2:179412914;179412913;179412912 |
N2A | 28579 | 85960;85961;85962 | chr2:178548187;178548186;178548185 | chr2:179412914;179412913;179412912 |
N2B | 22082 | 66469;66470;66471 | chr2:178548187;178548186;178548185 | chr2:179412914;179412913;179412912 |
Novex-1 | 22207 | 66844;66845;66846 | chr2:178548187;178548186;178548185 | chr2:179412914;179412913;179412912 |
Novex-2 | 22274 | 67045;67046;67047 | chr2:178548187;178548186;178548185 | chr2:179412914;179412913;179412912 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1234293999 | 0.366 | 0.83 | D | 0.856 | 0.424 | 0.557090038421 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1213 | likely_benign | 0.1477 | benign | -0.671 | Destabilizing | 0.41 | N | 0.539 | neutral | N | 0.484453972 | None | None | N |
G/C | 0.1709 | likely_benign | 0.2085 | benign | -0.707 | Destabilizing | 0.974 | D | 0.876 | deleterious | N | 0.500711803 | None | None | N |
G/D | 0.2715 | likely_benign | 0.2767 | benign | -1.606 | Destabilizing | 0.709 | D | 0.725 | prob.delet. | N | 0.499190866 | None | None | N |
G/E | 0.3335 | likely_benign | 0.3446 | ambiguous | -1.579 | Destabilizing | 0.013 | N | 0.603 | neutral | None | None | None | None | N |
G/F | 0.6519 | likely_pathogenic | 0.7197 | pathogenic | -0.822 | Destabilizing | 0.98 | D | 0.877 | deleterious | None | None | None | None | N |
G/H | 0.401 | ambiguous | 0.4077 | ambiguous | -1.585 | Destabilizing | 0.98 | D | 0.852 | deleterious | None | None | None | None | N |
G/I | 0.5536 | ambiguous | 0.6107 | pathogenic | -0.021 | Destabilizing | 0.866 | D | 0.881 | deleterious | None | None | None | None | N |
G/K | 0.6841 | likely_pathogenic | 0.6798 | pathogenic | -1.081 | Destabilizing | 0.764 | D | 0.766 | deleterious | None | None | None | None | N |
G/L | 0.5636 | ambiguous | 0.622 | pathogenic | -0.021 | Destabilizing | 0.866 | D | 0.86 | deleterious | None | None | None | None | N |
G/M | 0.556 | ambiguous | 0.6297 | pathogenic | -0.014 | Destabilizing | 0.993 | D | 0.877 | deleterious | None | None | None | None | N |
G/N | 0.2699 | likely_benign | 0.2967 | benign | -0.911 | Destabilizing | 0.764 | D | 0.652 | neutral | None | None | None | None | N |
G/P | 0.9932 | likely_pathogenic | 0.9929 | pathogenic | -0.195 | Destabilizing | 0.866 | D | 0.853 | deleterious | None | None | None | None | N |
G/Q | 0.4312 | ambiguous | 0.4387 | ambiguous | -0.974 | Destabilizing | 0.764 | D | 0.854 | deleterious | None | None | None | None | N |
G/R | 0.5408 | ambiguous | 0.5104 | ambiguous | -0.975 | Destabilizing | 0.709 | D | 0.853 | deleterious | N | 0.482123341 | None | None | N |
G/S | 0.0741 | likely_benign | 0.0859 | benign | -1.17 | Destabilizing | 0.004 | N | 0.399 | neutral | D | 0.526930501 | None | None | N |
G/T | 0.2205 | likely_benign | 0.2551 | benign | -1.065 | Destabilizing | 0.764 | D | 0.764 | deleterious | None | None | None | None | N |
G/V | 0.4088 | ambiguous | 0.4627 | ambiguous | -0.195 | Destabilizing | 0.83 | D | 0.856 | deleterious | D | 0.537298707 | None | None | N |
G/W | 0.5752 | likely_pathogenic | 0.5635 | ambiguous | -1.421 | Destabilizing | 0.993 | D | 0.832 | deleterious | None | None | None | None | N |
G/Y | 0.4671 | ambiguous | 0.516 | ambiguous | -0.907 | Destabilizing | 0.98 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.