Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31149 | 93670;93671;93672 | chr2:178548181;178548180;178548179 | chr2:179412908;179412907;179412906 |
N2AB | 29508 | 88747;88748;88749 | chr2:178548181;178548180;178548179 | chr2:179412908;179412907;179412906 |
N2A | 28581 | 85966;85967;85968 | chr2:178548181;178548180;178548179 | chr2:179412908;179412907;179412906 |
N2B | 22084 | 66475;66476;66477 | chr2:178548181;178548180;178548179 | chr2:179412908;179412907;179412906 |
Novex-1 | 22209 | 66850;66851;66852 | chr2:178548181;178548180;178548179 | chr2:179412908;179412907;179412906 |
Novex-2 | 22276 | 67051;67052;67053 | chr2:178548181;178548180;178548179 | chr2:179412908;179412907;179412906 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.248 | N | 0.377 | 0.063 | 0.424073947737 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2297 | likely_benign | 0.2516 | benign | -2.719 | Highly Destabilizing | 0.97 | D | 0.686 | prob.neutral | None | None | None | None | N |
L/C | 0.2863 | likely_benign | 0.2899 | benign | -1.847 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
L/D | 0.6587 | likely_pathogenic | 0.7076 | pathogenic | -3.188 | Highly Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
L/E | 0.3376 | likely_benign | 0.3496 | ambiguous | -2.984 | Highly Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
L/F | 0.1131 | likely_benign | 0.1223 | benign | -1.651 | Destabilizing | 0.996 | D | 0.726 | prob.delet. | None | None | None | None | N |
L/G | 0.5675 | likely_pathogenic | 0.6116 | pathogenic | -3.225 | Highly Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
L/H | 0.1433 | likely_benign | 0.1441 | benign | -2.681 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
L/I | 0.0654 | likely_benign | 0.0677 | benign | -1.251 | Destabilizing | 0.155 | N | 0.299 | neutral | None | None | None | None | N |
L/K | 0.2394 | likely_benign | 0.2568 | benign | -2.112 | Highly Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
L/M | 0.1008 | likely_benign | 0.1033 | benign | -1.117 | Destabilizing | 0.994 | D | 0.721 | prob.delet. | N | 0.502685417 | None | None | N |
L/N | 0.3673 | ambiguous | 0.4358 | ambiguous | -2.405 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
L/P | 0.9706 | likely_pathogenic | 0.9697 | pathogenic | -1.724 | Destabilizing | 0.998 | D | 0.781 | deleterious | N | 0.492043934 | None | None | N |
L/Q | 0.1252 | likely_benign | 0.1241 | benign | -2.309 | Highly Destabilizing | 0.998 | D | 0.73 | prob.delet. | N | 0.484790303 | None | None | N |
L/R | 0.1629 | likely_benign | 0.1551 | benign | -1.724 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | N | 0.464182957 | None | None | N |
L/S | 0.2537 | likely_benign | 0.2839 | benign | -3.031 | Highly Destabilizing | 0.996 | D | 0.7 | prob.neutral | None | None | None | None | N |
L/T | 0.1792 | likely_benign | 0.1969 | benign | -2.702 | Highly Destabilizing | 0.97 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/V | 0.0665 | likely_benign | 0.0663 | benign | -1.724 | Destabilizing | 0.248 | N | 0.377 | neutral | N | 0.389591985 | None | None | N |
L/W | 0.2497 | likely_benign | 0.2303 | benign | -2.096 | Highly Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
L/Y | 0.2562 | likely_benign | 0.271 | benign | -1.848 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.