Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31152 | 93679;93680;93681 | chr2:178548172;178548171;178548170 | chr2:179412899;179412898;179412897 |
N2AB | 29511 | 88756;88757;88758 | chr2:178548172;178548171;178548170 | chr2:179412899;179412898;179412897 |
N2A | 28584 | 85975;85976;85977 | chr2:178548172;178548171;178548170 | chr2:179412899;179412898;179412897 |
N2B | 22087 | 66484;66485;66486 | chr2:178548172;178548171;178548170 | chr2:179412899;179412898;179412897 |
Novex-1 | 22212 | 66859;66860;66861 | chr2:178548172;178548171;178548170 | chr2:179412899;179412898;179412897 |
Novex-2 | 22279 | 67060;67061;67062 | chr2:178548172;178548171;178548170 | chr2:179412899;179412898;179412897 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/R | None | None | 0.912 | N | 0.637 | 0.257 | 0.510642626009 | gnomAD-4.0.0 | 1.20041E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3126E-06 | 0 | 0 |
M/V | None | None | 0.48 | N | 0.305 | 0.166 | 0.359763055319 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.4558 | ambiguous | 0.5337 | ambiguous | -2.058 | Highly Destabilizing | 0.55 | D | 0.467 | neutral | None | None | None | None | N |
M/C | 0.6698 | likely_pathogenic | 0.703 | pathogenic | -2.017 | Highly Destabilizing | 0.993 | D | 0.673 | neutral | None | None | None | None | N |
M/D | 0.9702 | likely_pathogenic | 0.9759 | pathogenic | -1.896 | Destabilizing | 0.932 | D | 0.683 | prob.neutral | None | None | None | None | N |
M/E | 0.7501 | likely_pathogenic | 0.7914 | pathogenic | -1.635 | Destabilizing | 0.932 | D | 0.649 | neutral | None | None | None | None | N |
M/F | 0.3324 | likely_benign | 0.3482 | ambiguous | -0.697 | Destabilizing | 0.009 | N | 0.224 | neutral | None | None | None | None | N |
M/G | 0.7284 | likely_pathogenic | 0.7552 | pathogenic | -2.558 | Highly Destabilizing | 0.932 | D | 0.653 | neutral | None | None | None | None | N |
M/H | 0.6814 | likely_pathogenic | 0.7175 | pathogenic | -2.209 | Highly Destabilizing | 0.96 | D | 0.685 | prob.neutral | None | None | None | None | N |
M/I | 0.4892 | ambiguous | 0.5689 | pathogenic | -0.606 | Destabilizing | 0.679 | D | 0.437 | neutral | N | 0.438575223 | None | None | N |
M/K | 0.2777 | likely_benign | 0.3538 | ambiguous | -1.181 | Destabilizing | 0.837 | D | 0.59 | neutral | N | 0.401846419 | None | None | N |
M/L | 0.1918 | likely_benign | 0.216 | benign | -0.606 | Destabilizing | 0.166 | N | 0.342 | neutral | N | 0.435745562 | None | None | N |
M/N | 0.7678 | likely_pathogenic | 0.8216 | pathogenic | -1.679 | Destabilizing | 0.932 | D | 0.659 | neutral | None | None | None | None | N |
M/P | 0.9944 | likely_pathogenic | 0.9954 | pathogenic | -1.074 | Destabilizing | 0.977 | D | 0.698 | prob.neutral | None | None | None | None | N |
M/Q | 0.3574 | ambiguous | 0.4131 | ambiguous | -1.307 | Destabilizing | 0.977 | D | 0.586 | neutral | None | None | None | None | N |
M/R | 0.3249 | likely_benign | 0.3905 | ambiguous | -1.4 | Destabilizing | 0.912 | D | 0.637 | neutral | N | 0.415295719 | None | None | N |
M/S | 0.5117 | ambiguous | 0.5863 | pathogenic | -2.211 | Highly Destabilizing | 0.584 | D | 0.537 | neutral | None | None | None | None | N |
M/T | 0.301 | likely_benign | 0.3708 | ambiguous | -1.811 | Destabilizing | 0.028 | N | 0.377 | neutral | N | 0.466300542 | None | None | N |
M/V | 0.1493 | likely_benign | 0.1736 | benign | -1.074 | Destabilizing | 0.48 | N | 0.305 | neutral | N | 0.448405428 | None | None | N |
M/W | 0.747 | likely_pathogenic | 0.7367 | pathogenic | -1.031 | Destabilizing | 0.993 | D | 0.669 | neutral | None | None | None | None | N |
M/Y | 0.5488 | ambiguous | 0.5553 | ambiguous | -0.969 | Destabilizing | 0.013 | N | 0.377 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.