Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31153 | 93682;93683;93684 | chr2:178548169;178548168;178548167 | chr2:179412896;179412895;179412894 |
N2AB | 29512 | 88759;88760;88761 | chr2:178548169;178548168;178548167 | chr2:179412896;179412895;179412894 |
N2A | 28585 | 85978;85979;85980 | chr2:178548169;178548168;178548167 | chr2:179412896;179412895;179412894 |
N2B | 22088 | 66487;66488;66489 | chr2:178548169;178548168;178548167 | chr2:179412896;179412895;179412894 |
Novex-1 | 22213 | 66862;66863;66864 | chr2:178548169;178548168;178548167 | chr2:179412896;179412895;179412894 |
Novex-2 | 22280 | 67063;67064;67065 | chr2:178548169;178548168;178548167 | chr2:179412896;179412895;179412894 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.896 | N | 0.601 | 0.383 | 0.465721554213 | gnomAD-4.0.0 | 6.8417E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99439E-07 | 0 | 0 |
R/K | None | None | 0.011 | N | 0.115 | 0.124 | 0.252162846088 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7957 | likely_pathogenic | 0.6348 | pathogenic | -2.187 | Highly Destabilizing | 0.825 | D | 0.546 | neutral | None | None | None | None | N |
R/C | 0.2515 | likely_benign | 0.1666 | benign | -2.119 | Highly Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
R/D | 0.9806 | likely_pathogenic | 0.954 | pathogenic | -0.903 | Destabilizing | 0.976 | D | 0.664 | neutral | None | None | None | None | N |
R/E | 0.7623 | likely_pathogenic | 0.6104 | pathogenic | -0.715 | Destabilizing | 0.851 | D | 0.465 | neutral | None | None | None | None | N |
R/F | 0.8754 | likely_pathogenic | 0.7474 | pathogenic | -1.613 | Destabilizing | 0.996 | D | 0.757 | deleterious | None | None | None | None | N |
R/G | 0.7236 | likely_pathogenic | 0.5156 | ambiguous | -2.493 | Highly Destabilizing | 0.896 | D | 0.601 | neutral | N | 0.482639866 | None | None | N |
R/H | 0.2637 | likely_benign | 0.183 | benign | -2.38 | Highly Destabilizing | 0.996 | D | 0.52 | neutral | None | None | None | None | N |
R/I | 0.644 | likely_pathogenic | 0.4565 | ambiguous | -1.302 | Destabilizing | 0.984 | D | 0.751 | deleterious | N | 0.493742682 | None | None | N |
R/K | 0.1057 | likely_benign | 0.0791 | benign | -1.573 | Destabilizing | 0.011 | N | 0.115 | neutral | N | 0.462857592 | None | None | N |
R/L | 0.5006 | ambiguous | 0.3063 | benign | -1.302 | Destabilizing | 0.919 | D | 0.601 | neutral | None | None | None | None | N |
R/M | 0.5275 | ambiguous | 0.3443 | ambiguous | -1.746 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
R/N | 0.9188 | likely_pathogenic | 0.847 | pathogenic | -1.286 | Destabilizing | 0.919 | D | 0.479 | neutral | None | None | None | None | N |
R/P | 0.9892 | likely_pathogenic | 0.9702 | pathogenic | -1.587 | Destabilizing | 0.988 | D | 0.702 | prob.neutral | None | None | None | None | N |
R/Q | 0.1418 | likely_benign | 0.111 | benign | -1.303 | Destabilizing | 0.919 | D | 0.513 | neutral | None | None | None | None | N |
R/S | 0.8902 | likely_pathogenic | 0.7731 | pathogenic | -2.279 | Highly Destabilizing | 0.896 | D | 0.545 | neutral | N | 0.502530701 | None | None | N |
R/T | 0.7875 | likely_pathogenic | 0.5963 | pathogenic | -1.896 | Destabilizing | 0.896 | D | 0.58 | neutral | N | 0.479664125 | None | None | N |
R/V | 0.7187 | likely_pathogenic | 0.5527 | ambiguous | -1.587 | Destabilizing | 0.988 | D | 0.664 | neutral | None | None | None | None | N |
R/W | 0.5943 | likely_pathogenic | 0.3859 | ambiguous | -1.08 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
R/Y | 0.7764 | likely_pathogenic | 0.6262 | pathogenic | -0.937 | Destabilizing | 0.996 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.