Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31162 | 93709;93710;93711 | chr2:178548142;178548141;178548140 | chr2:179412869;179412868;179412867 |
N2AB | 29521 | 88786;88787;88788 | chr2:178548142;178548141;178548140 | chr2:179412869;179412868;179412867 |
N2A | 28594 | 86005;86006;86007 | chr2:178548142;178548141;178548140 | chr2:179412869;179412868;179412867 |
N2B | 22097 | 66514;66515;66516 | chr2:178548142;178548141;178548140 | chr2:179412869;179412868;179412867 |
Novex-1 | 22222 | 66889;66890;66891 | chr2:178548142;178548141;178548140 | chr2:179412869;179412868;179412867 |
Novex-2 | 22289 | 67090;67091;67092 | chr2:178548142;178548141;178548140 | chr2:179412869;179412868;179412867 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1553529185 | None | 0.001 | N | 0.217 | 0.167 | 0.21279746466 | gnomAD-4.0.0 | 3.18211E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76599E-05 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
E/K | rs762566802 | None | 0.491 | N | 0.299 | 0.222 | 0.206339911435 | gnomAD-4.0.0 | 1.20032E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1079 | likely_benign | 0.1247 | benign | -0.695 | Destabilizing | 0.001 | N | 0.217 | neutral | N | 0.446930922 | None | None | N |
E/C | 0.7245 | likely_pathogenic | 0.7732 | pathogenic | -0.346 | Destabilizing | 0.972 | D | 0.455 | neutral | None | None | None | None | N |
E/D | 0.156 | likely_benign | 0.1892 | benign | -0.742 | Destabilizing | 0.662 | D | 0.318 | neutral | N | 0.455993122 | None | None | N |
E/F | 0.6588 | likely_pathogenic | 0.7335 | pathogenic | -0.359 | Destabilizing | 0.004 | N | 0.351 | neutral | None | None | None | None | N |
E/G | 0.1966 | likely_benign | 0.2118 | benign | -0.971 | Destabilizing | 0.001 | N | 0.254 | neutral | N | 0.499879972 | None | None | N |
E/H | 0.4341 | ambiguous | 0.463 | ambiguous | -0.33 | Destabilizing | 0.965 | D | 0.432 | neutral | None | None | None | None | N |
E/I | 0.2127 | likely_benign | 0.2766 | benign | 0.031 | Stabilizing | 0.209 | N | 0.451 | neutral | None | None | None | None | N |
E/K | 0.1436 | likely_benign | 0.1538 | benign | -0.299 | Destabilizing | 0.491 | N | 0.299 | neutral | N | 0.387498616 | None | None | N |
E/L | 0.2505 | likely_benign | 0.3127 | benign | 0.031 | Stabilizing | 0.002 | N | 0.34 | neutral | None | None | None | None | N |
E/M | 0.3022 | likely_benign | 0.3585 | ambiguous | 0.249 | Stabilizing | 0.818 | D | 0.469 | neutral | None | None | None | None | N |
E/N | 0.2506 | likely_benign | 0.3157 | benign | -0.643 | Destabilizing | 0.561 | D | 0.384 | neutral | None | None | None | None | N |
E/P | 0.2563 | likely_benign | 0.3062 | benign | -0.19 | Destabilizing | 0.004 | N | 0.254 | neutral | None | None | None | None | N |
E/Q | 0.1363 | likely_benign | 0.1395 | benign | -0.57 | Destabilizing | 0.662 | D | 0.387 | neutral | N | 0.452240741 | None | None | N |
E/R | 0.2404 | likely_benign | 0.2493 | benign | 0.033 | Stabilizing | 0.722 | D | 0.404 | neutral | None | None | None | None | N |
E/S | 0.1748 | likely_benign | 0.2139 | benign | -0.867 | Destabilizing | 0.209 | N | 0.292 | neutral | None | None | None | None | N |
E/T | 0.1651 | likely_benign | 0.2039 | benign | -0.649 | Destabilizing | 0.345 | N | 0.423 | neutral | None | None | None | None | N |
E/V | 0.1201 | likely_benign | 0.1538 | benign | -0.19 | Destabilizing | 0.005 | N | 0.237 | neutral | N | 0.44065831 | None | None | N |
E/W | 0.8777 | likely_pathogenic | 0.8872 | pathogenic | -0.146 | Destabilizing | 0.991 | D | 0.469 | neutral | None | None | None | None | N |
E/Y | 0.5995 | likely_pathogenic | 0.6557 | pathogenic | -0.124 | Destabilizing | 0.692 | D | 0.534 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.