Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31168 | 93727;93728;93729 | chr2:178548124;178548123;178548122 | chr2:179412851;179412850;179412849 |
N2AB | 29527 | 88804;88805;88806 | chr2:178548124;178548123;178548122 | chr2:179412851;179412850;179412849 |
N2A | 28600 | 86023;86024;86025 | chr2:178548124;178548123;178548122 | chr2:179412851;179412850;179412849 |
N2B | 22103 | 66532;66533;66534 | chr2:178548124;178548123;178548122 | chr2:179412851;179412850;179412849 |
Novex-1 | 22228 | 66907;66908;66909 | chr2:178548124;178548123;178548122 | chr2:179412851;179412850;179412849 |
Novex-2 | 22295 | 67108;67109;67110 | chr2:178548124;178548123;178548122 | chr2:179412851;179412850;179412849 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.912 | N | 0.305 | 0.124 | 0.214338557667 | gnomAD-4.0.0 | 1.59108E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1381 | likely_benign | 0.1562 | benign | -0.248 | Destabilizing | 0.054 | N | 0.279 | neutral | None | None | None | None | N |
Q/C | 0.4954 | ambiguous | 0.5596 | ambiguous | -0.059 | Destabilizing | 0.981 | D | 0.24 | neutral | None | None | None | None | N |
Q/D | 0.2129 | likely_benign | 0.2376 | benign | 0.179 | Stabilizing | 0.388 | N | 0.202 | neutral | None | None | None | None | N |
Q/E | 0.0825 | likely_benign | 0.0825 | benign | 0.205 | Stabilizing | 0.165 | N | 0.283 | neutral | N | 0.418778741 | None | None | N |
Q/F | 0.4732 | ambiguous | 0.5469 | ambiguous | -0.351 | Destabilizing | 0.527 | D | 0.287 | neutral | None | None | None | None | N |
Q/G | 0.1703 | likely_benign | 0.1897 | benign | -0.471 | Destabilizing | 0.207 | N | 0.293 | neutral | None | None | None | None | N |
Q/H | 0.1412 | likely_benign | 0.1689 | benign | -0.101 | Destabilizing | 0.912 | D | 0.305 | neutral | N | 0.466609974 | None | None | N |
Q/I | 0.2721 | likely_benign | 0.3338 | benign | 0.264 | Stabilizing | 0.241 | N | 0.312 | neutral | None | None | None | None | N |
Q/K | 0.1061 | likely_benign | 0.1107 | benign | 0.096 | Stabilizing | 0.165 | N | 0.255 | neutral | N | 0.437788576 | None | None | N |
Q/L | 0.0918 | likely_benign | 0.1031 | benign | 0.264 | Stabilizing | 0.001 | N | 0.182 | neutral | N | 0.459222641 | None | None | N |
Q/M | 0.2352 | likely_benign | 0.2688 | benign | 0.194 | Stabilizing | 0.527 | D | 0.305 | neutral | None | None | None | None | N |
Q/N | 0.1382 | likely_benign | 0.1619 | benign | -0.435 | Destabilizing | 0.388 | N | 0.218 | neutral | None | None | None | None | N |
Q/P | 0.2804 | likely_benign | 0.3156 | benign | 0.122 | Stabilizing | 0.492 | N | 0.337 | neutral | N | 0.499682397 | None | None | N |
Q/R | 0.126 | likely_benign | 0.1229 | benign | 0.264 | Stabilizing | 0.492 | N | 0.229 | neutral | N | 0.428361017 | None | None | N |
Q/S | 0.1417 | likely_benign | 0.1613 | benign | -0.455 | Destabilizing | 0.01 | N | 0.143 | neutral | None | None | None | None | N |
Q/T | 0.1255 | likely_benign | 0.1482 | benign | -0.256 | Destabilizing | 0.116 | N | 0.269 | neutral | None | None | None | None | N |
Q/V | 0.1793 | likely_benign | 0.2114 | benign | 0.122 | Stabilizing | 0.241 | N | 0.303 | neutral | None | None | None | None | N |
Q/W | 0.4607 | ambiguous | 0.4838 | ambiguous | -0.338 | Destabilizing | 0.981 | D | 0.254 | neutral | None | None | None | None | N |
Q/Y | 0.2864 | likely_benign | 0.3338 | benign | -0.058 | Destabilizing | 0.818 | D | 0.308 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.