Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31173 | 93742;93743;93744 | chr2:178548109;178548108;178548107 | chr2:179412836;179412835;179412834 |
N2AB | 29532 | 88819;88820;88821 | chr2:178548109;178548108;178548107 | chr2:179412836;179412835;179412834 |
N2A | 28605 | 86038;86039;86040 | chr2:178548109;178548108;178548107 | chr2:179412836;179412835;179412834 |
N2B | 22108 | 66547;66548;66549 | chr2:178548109;178548108;178548107 | chr2:179412836;179412835;179412834 |
Novex-1 | 22233 | 66922;66923;66924 | chr2:178548109;178548108;178548107 | chr2:179412836;179412835;179412834 |
Novex-2 | 22300 | 67123;67124;67125 | chr2:178548109;178548108;178548107 | chr2:179412836;179412835;179412834 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1440743167 | 0.027 | 0.026 | N | 0.275 | 0.07 | 0.361758802978 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1893 | likely_benign | 0.2619 | benign | -1.795 | Destabilizing | 0.896 | D | 0.663 | neutral | D | 0.52639457 | None | None | N |
V/C | 0.7954 | likely_pathogenic | 0.8513 | pathogenic | -1.368 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/D | 0.9439 | likely_pathogenic | 0.9582 | pathogenic | -1.716 | Destabilizing | 0.996 | D | 0.819 | deleterious | None | None | None | None | N |
V/E | 0.8705 | likely_pathogenic | 0.9022 | pathogenic | -1.504 | Destabilizing | 0.995 | D | 0.783 | deleterious | D | 0.542124553 | None | None | N |
V/F | 0.4549 | ambiguous | 0.548 | ambiguous | -1.01 | Destabilizing | 0.976 | D | 0.749 | deleterious | None | None | None | None | N |
V/G | 0.6221 | likely_pathogenic | 0.6853 | pathogenic | -2.334 | Highly Destabilizing | 0.995 | D | 0.815 | deleterious | D | 0.542124553 | None | None | N |
V/H | 0.9418 | likely_pathogenic | 0.9599 | pathogenic | -1.932 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
V/I | 0.0844 | likely_benign | 0.0912 | benign | -0.309 | Destabilizing | 0.026 | N | 0.275 | neutral | N | 0.504072284 | None | None | N |
V/K | 0.8864 | likely_pathogenic | 0.9115 | pathogenic | -1.371 | Destabilizing | 0.988 | D | 0.785 | deleterious | None | None | None | None | N |
V/L | 0.2495 | likely_benign | 0.3067 | benign | -0.309 | Destabilizing | 0.011 | N | 0.297 | neutral | N | 0.512456907 | None | None | N |
V/M | 0.2244 | likely_benign | 0.2755 | benign | -0.408 | Destabilizing | 0.976 | D | 0.669 | neutral | None | None | None | None | N |
V/N | 0.8623 | likely_pathogenic | 0.9082 | pathogenic | -1.607 | Destabilizing | 0.996 | D | 0.828 | deleterious | None | None | None | None | N |
V/P | 0.9083 | likely_pathogenic | 0.9345 | pathogenic | -0.775 | Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
V/Q | 0.8503 | likely_pathogenic | 0.8893 | pathogenic | -1.431 | Destabilizing | 0.996 | D | 0.791 | deleterious | None | None | None | None | N |
V/R | 0.8479 | likely_pathogenic | 0.8723 | pathogenic | -1.294 | Destabilizing | 0.996 | D | 0.817 | deleterious | None | None | None | None | N |
V/S | 0.5602 | ambiguous | 0.6653 | pathogenic | -2.33 | Highly Destabilizing | 0.988 | D | 0.783 | deleterious | None | None | None | None | N |
V/T | 0.3209 | likely_benign | 0.4096 | ambiguous | -1.951 | Destabilizing | 0.919 | D | 0.656 | neutral | None | None | None | None | N |
V/W | 0.9575 | likely_pathogenic | 0.9711 | pathogenic | -1.391 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
V/Y | 0.8842 | likely_pathogenic | 0.9195 | pathogenic | -1.0 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.