Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31180 | 93763;93764;93765 | chr2:178548088;178548087;178548086 | chr2:179412815;179412814;179412813 |
N2AB | 29539 | 88840;88841;88842 | chr2:178548088;178548087;178548086 | chr2:179412815;179412814;179412813 |
N2A | 28612 | 86059;86060;86061 | chr2:178548088;178548087;178548086 | chr2:179412815;179412814;179412813 |
N2B | 22115 | 66568;66569;66570 | chr2:178548088;178548087;178548086 | chr2:179412815;179412814;179412813 |
Novex-1 | 22240 | 66943;66944;66945 | chr2:178548088;178548087;178548086 | chr2:179412815;179412814;179412813 |
Novex-2 | 22307 | 67144;67145;67146 | chr2:178548088;178548087;178548086 | chr2:179412815;179412814;179412813 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.659 | N | 0.299 | 0.16 | 0.186928172975 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0816 | likely_benign | 0.0798 | benign | -0.792 | Destabilizing | 0.911 | D | 0.453 | neutral | N | 0.423864848 | None | None | N |
T/C | 0.3713 | ambiguous | 0.4125 | ambiguous | -0.499 | Destabilizing | 1.0 | D | 0.514 | neutral | None | None | None | None | N |
T/D | 0.3802 | ambiguous | 0.3584 | ambiguous | -0.502 | Destabilizing | 0.985 | D | 0.495 | neutral | None | None | None | None | N |
T/E | 0.2282 | likely_benign | 0.2077 | benign | -0.362 | Destabilizing | 0.985 | D | 0.489 | neutral | None | None | None | None | N |
T/F | 0.3224 | likely_benign | 0.3477 | ambiguous | -0.526 | Destabilizing | 0.999 | D | 0.557 | neutral | None | None | None | None | N |
T/G | 0.2477 | likely_benign | 0.2405 | benign | -1.169 | Destabilizing | 0.985 | D | 0.501 | neutral | None | None | None | None | N |
T/H | 0.2639 | likely_benign | 0.2755 | benign | -1.259 | Destabilizing | 1.0 | D | 0.549 | neutral | None | None | None | None | N |
T/I | 0.2288 | likely_benign | 0.2435 | benign | 0.166 | Stabilizing | 0.997 | D | 0.539 | neutral | N | 0.495997092 | None | None | N |
T/K | 0.1988 | likely_benign | 0.1748 | benign | -0.461 | Destabilizing | 0.469 | N | 0.333 | neutral | None | None | None | None | N |
T/L | 0.1371 | likely_benign | 0.1401 | benign | 0.166 | Stabilizing | 0.993 | D | 0.485 | neutral | None | None | None | None | N |
T/M | 0.0851 | likely_benign | 0.0872 | benign | 0.084 | Stabilizing | 1.0 | D | 0.518 | neutral | None | None | None | None | N |
T/N | 0.1212 | likely_benign | 0.1208 | benign | -0.889 | Destabilizing | 0.98 | D | 0.495 | neutral | N | 0.485953457 | None | None | N |
T/P | 0.7248 | likely_pathogenic | 0.6421 | pathogenic | -0.12 | Destabilizing | 0.997 | D | 0.545 | neutral | N | 0.497980006 | None | None | N |
T/Q | 0.1793 | likely_benign | 0.1743 | benign | -0.741 | Destabilizing | 0.996 | D | 0.554 | neutral | None | None | None | None | N |
T/R | 0.1749 | likely_benign | 0.1481 | benign | -0.532 | Destabilizing | 0.323 | N | 0.344 | neutral | None | None | None | None | N |
T/S | 0.1044 | likely_benign | 0.1063 | benign | -1.168 | Destabilizing | 0.659 | D | 0.299 | neutral | N | 0.431233537 | None | None | N |
T/V | 0.1553 | likely_benign | 0.1653 | benign | -0.12 | Destabilizing | 0.993 | D | 0.511 | neutral | None | None | None | None | N |
T/W | 0.6285 | likely_pathogenic | 0.6193 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.564 | neutral | None | None | None | None | N |
T/Y | 0.3099 | likely_benign | 0.3224 | benign | -0.272 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.