Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31192 | 93799;93800;93801 | chr2:178548052;178548051;178548050 | chr2:179412779;179412778;179412777 |
N2AB | 29551 | 88876;88877;88878 | chr2:178548052;178548051;178548050 | chr2:179412779;179412778;179412777 |
N2A | 28624 | 86095;86096;86097 | chr2:178548052;178548051;178548050 | chr2:179412779;179412778;179412777 |
N2B | 22127 | 66604;66605;66606 | chr2:178548052;178548051;178548050 | chr2:179412779;179412778;179412777 |
Novex-1 | 22252 | 66979;66980;66981 | chr2:178548052;178548051;178548050 | chr2:179412779;179412778;179412777 |
Novex-2 | 22319 | 67180;67181;67182 | chr2:178548052;178548051;178548050 | chr2:179412779;179412778;179412777 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs779450650 | -0.462 | 0.085 | N | 0.448 | 0.16 | 0.137902524267 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.87E-06 | 0 |
A/T | rs779450650 | -0.462 | 0.085 | N | 0.448 | 0.16 | 0.137902524267 | gnomAD-4.0.0 | 1.59108E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85791E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5798 | likely_pathogenic | 0.526 | ambiguous | -0.69 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
A/D | 0.9028 | likely_pathogenic | 0.834 | pathogenic | -0.73 | Destabilizing | 0.978 | D | 0.813 | deleterious | N | 0.485954321 | None | None | I |
A/E | 0.8142 | likely_pathogenic | 0.7043 | pathogenic | -0.903 | Destabilizing | 0.983 | D | 0.769 | deleterious | None | None | None | None | I |
A/F | 0.5999 | likely_pathogenic | 0.4725 | ambiguous | -0.976 | Destabilizing | 0.992 | D | 0.847 | deleterious | None | None | None | None | I |
A/G | 0.3278 | likely_benign | 0.2917 | benign | -0.264 | Destabilizing | 0.928 | D | 0.602 | neutral | N | 0.475140993 | None | None | I |
A/H | 0.8109 | likely_pathogenic | 0.71 | pathogenic | -0.264 | Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | I |
A/I | 0.433 | ambiguous | 0.3925 | ambiguous | -0.389 | Destabilizing | 0.983 | D | 0.773 | deleterious | None | None | None | None | I |
A/K | 0.8546 | likely_pathogenic | 0.7753 | pathogenic | -0.57 | Destabilizing | 0.983 | D | 0.775 | deleterious | None | None | None | None | I |
A/L | 0.4792 | ambiguous | 0.4098 | ambiguous | -0.389 | Destabilizing | 0.895 | D | 0.664 | neutral | None | None | None | None | I |
A/M | 0.4452 | ambiguous | 0.37 | ambiguous | -0.344 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | I |
A/N | 0.7021 | likely_pathogenic | 0.6161 | pathogenic | -0.222 | Destabilizing | 0.983 | D | 0.825 | deleterious | None | None | None | None | I |
A/P | 0.9799 | likely_pathogenic | 0.9695 | pathogenic | -0.31 | Destabilizing | 0.989 | D | 0.771 | deleterious | D | 0.523772673 | None | None | I |
A/Q | 0.7294 | likely_pathogenic | 0.625 | pathogenic | -0.574 | Destabilizing | 0.992 | D | 0.799 | deleterious | None | None | None | None | I |
A/R | 0.7687 | likely_pathogenic | 0.6587 | pathogenic | -0.023 | Destabilizing | 0.983 | D | 0.783 | deleterious | None | None | None | None | I |
A/S | 0.1617 | likely_benign | 0.1555 | benign | -0.367 | Destabilizing | 0.865 | D | 0.516 | neutral | N | 0.505187004 | None | None | I |
A/T | 0.205 | likely_benign | 0.1811 | benign | -0.473 | Destabilizing | 0.085 | N | 0.448 | neutral | N | 0.486714789 | None | None | I |
A/V | 0.2004 | likely_benign | 0.1766 | benign | -0.31 | Destabilizing | 0.865 | D | 0.63 | neutral | N | 0.492929783 | None | None | I |
A/W | 0.9504 | likely_pathogenic | 0.9046 | pathogenic | -1.077 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | I |
A/Y | 0.8124 | likely_pathogenic | 0.7013 | pathogenic | -0.736 | Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.