Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31198 | 93817;93818;93819 | chr2:178548034;178548033;178548032 | chr2:179412761;179412760;179412759 |
N2AB | 29557 | 88894;88895;88896 | chr2:178548034;178548033;178548032 | chr2:179412761;179412760;179412759 |
N2A | 28630 | 86113;86114;86115 | chr2:178548034;178548033;178548032 | chr2:179412761;179412760;179412759 |
N2B | 22133 | 66622;66623;66624 | chr2:178548034;178548033;178548032 | chr2:179412761;179412760;179412759 |
Novex-1 | 22258 | 66997;66998;66999 | chr2:178548034;178548033;178548032 | chr2:179412761;179412760;179412759 |
Novex-2 | 22325 | 67198;67199;67200 | chr2:178548034;178548033;178548032 | chr2:179412761;179412760;179412759 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs751148256 | -1.943 | 0.99 | N | 0.606 | 0.239 | 0.381746406553 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65673E-04 |
R/G | rs751148256 | -1.943 | 0.99 | N | 0.606 | 0.239 | 0.381746406553 | gnomAD-4.0.0 | 3.18228E-06 | None | None | None | None | N | None | 0 | 4.57373E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6658 | likely_pathogenic | 0.6403 | pathogenic | -1.094 | Destabilizing | 0.985 | D | 0.549 | neutral | None | None | None | None | N |
R/C | 0.3668 | ambiguous | 0.343 | ambiguous | -1.13 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
R/D | 0.9565 | likely_pathogenic | 0.9528 | pathogenic | -0.377 | Destabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | N |
R/E | 0.7312 | likely_pathogenic | 0.7246 | pathogenic | -0.185 | Destabilizing | 0.971 | D | 0.507 | neutral | None | None | None | None | N |
R/F | 0.911 | likely_pathogenic | 0.9101 | pathogenic | -0.413 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
R/G | 0.6672 | likely_pathogenic | 0.6193 | pathogenic | -1.471 | Destabilizing | 0.99 | D | 0.606 | neutral | N | 0.472781011 | None | None | N |
R/H | 0.3713 | ambiguous | 0.3554 | ambiguous | -1.548 | Destabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
R/I | 0.6704 | likely_pathogenic | 0.6524 | pathogenic | -0.038 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.466121183 | None | None | N |
R/K | 0.2362 | likely_benign | 0.2361 | benign | -1.099 | Destabilizing | 0.911 | D | 0.5 | neutral | N | 0.482651288 | None | None | N |
R/L | 0.6525 | likely_pathogenic | 0.6203 | pathogenic | -0.038 | Destabilizing | 0.985 | D | 0.606 | neutral | None | None | None | None | N |
R/M | 0.666 | likely_pathogenic | 0.6239 | pathogenic | -0.553 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
R/N | 0.9188 | likely_pathogenic | 0.9202 | pathogenic | -0.851 | Destabilizing | 0.998 | D | 0.569 | neutral | None | None | None | None | N |
R/P | 0.9774 | likely_pathogenic | 0.9689 | pathogenic | -0.372 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
R/Q | 0.1923 | likely_benign | 0.1875 | benign | -0.745 | Destabilizing | 0.719 | D | 0.361 | neutral | None | None | None | None | N |
R/S | 0.8023 | likely_pathogenic | 0.7669 | pathogenic | -1.599 | Destabilizing | 0.98 | D | 0.584 | neutral | N | 0.379646271 | None | None | N |
R/T | 0.5719 | likely_pathogenic | 0.5204 | ambiguous | -1.198 | Destabilizing | 0.99 | D | 0.631 | neutral | N | 0.485766164 | None | None | N |
R/V | 0.626 | likely_pathogenic | 0.6032 | pathogenic | -0.372 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
R/W | 0.5781 | likely_pathogenic | 0.5252 | ambiguous | -0.015 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
R/Y | 0.8288 | likely_pathogenic | 0.8252 | pathogenic | 0.211 | Stabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.