Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31205 | 93838;93839;93840 | chr2:178548013;178548012;178548011 | chr2:179412740;179412739;179412738 |
N2AB | 29564 | 88915;88916;88917 | chr2:178548013;178548012;178548011 | chr2:179412740;179412739;179412738 |
N2A | 28637 | 86134;86135;86136 | chr2:178548013;178548012;178548011 | chr2:179412740;179412739;179412738 |
N2B | 22140 | 66643;66644;66645 | chr2:178548013;178548012;178548011 | chr2:179412740;179412739;179412738 |
Novex-1 | 22265 | 67018;67019;67020 | chr2:178548013;178548012;178548011 | chr2:179412740;179412739;179412738 |
Novex-2 | 22332 | 67219;67220;67221 | chr2:178548013;178548012;178548011 | chr2:179412740;179412739;179412738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.006 | N | 0.115 | 0.059 | 0.30921473904 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43287E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4042 | ambiguous | 0.3945 | ambiguous | -1.249 | Destabilizing | 0.355 | N | 0.393 | neutral | None | None | None | None | N |
I/C | 0.7117 | likely_pathogenic | 0.6868 | pathogenic | -0.779 | Destabilizing | 0.991 | D | 0.395 | neutral | None | None | None | None | N |
I/D | 0.7635 | likely_pathogenic | 0.7246 | pathogenic | -0.617 | Destabilizing | 0.966 | D | 0.604 | neutral | None | None | None | None | N |
I/E | 0.5947 | likely_pathogenic | 0.5549 | ambiguous | -0.656 | Destabilizing | 0.905 | D | 0.563 | neutral | None | None | None | None | N |
I/F | 0.1832 | likely_benign | 0.1857 | benign | -0.897 | Destabilizing | 0.779 | D | 0.377 | neutral | N | 0.450117582 | None | None | N |
I/G | 0.7483 | likely_pathogenic | 0.7385 | pathogenic | -1.519 | Destabilizing | 0.905 | D | 0.531 | neutral | None | None | None | None | N |
I/H | 0.5667 | likely_pathogenic | 0.5393 | ambiguous | -0.687 | Destabilizing | 0.991 | D | 0.557 | neutral | None | None | None | None | N |
I/K | 0.5058 | ambiguous | 0.4498 | ambiguous | -0.807 | Destabilizing | 0.905 | D | 0.539 | neutral | None | None | None | None | N |
I/L | 0.1118 | likely_benign | 0.1102 | benign | -0.613 | Destabilizing | 0.001 | N | 0.119 | neutral | N | 0.409577681 | None | None | N |
I/M | 0.0991 | likely_benign | 0.0986 | benign | -0.481 | Destabilizing | 0.779 | D | 0.487 | neutral | N | 0.479920414 | None | None | N |
I/N | 0.3146 | likely_benign | 0.2845 | benign | -0.59 | Destabilizing | 0.956 | D | 0.546 | neutral | N | 0.498852891 | None | None | N |
I/P | 0.8068 | likely_pathogenic | 0.807 | pathogenic | -0.792 | Destabilizing | 0.966 | D | 0.593 | neutral | None | None | None | None | N |
I/Q | 0.4888 | ambiguous | 0.4605 | ambiguous | -0.805 | Destabilizing | 0.966 | D | 0.54 | neutral | None | None | None | None | N |
I/R | 0.4194 | ambiguous | 0.3492 | ambiguous | -0.186 | Destabilizing | 0.905 | D | 0.549 | neutral | None | None | None | None | N |
I/S | 0.3743 | ambiguous | 0.3375 | benign | -1.164 | Destabilizing | 0.877 | D | 0.489 | neutral | N | 0.498332816 | None | None | N |
I/T | 0.2047 | likely_benign | 0.1893 | benign | -1.089 | Destabilizing | 0.501 | D | 0.369 | neutral | N | 0.405854224 | None | None | N |
I/V | 0.0754 | likely_benign | 0.0732 | benign | -0.792 | Destabilizing | 0.006 | N | 0.115 | neutral | N | 0.403921145 | None | None | N |
I/W | 0.7924 | likely_pathogenic | 0.7863 | pathogenic | -0.922 | Destabilizing | 0.991 | D | 0.65 | prob.neutral | None | None | None | None | N |
I/Y | 0.581 | likely_pathogenic | 0.5487 | ambiguous | -0.702 | Destabilizing | 0.905 | D | 0.481 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.