Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31206 | 93841;93842;93843 | chr2:178548010;178548009;178548008 | chr2:179412737;179412736;179412735 |
N2AB | 29565 | 88918;88919;88920 | chr2:178548010;178548009;178548008 | chr2:179412737;179412736;179412735 |
N2A | 28638 | 86137;86138;86139 | chr2:178548010;178548009;178548008 | chr2:179412737;179412736;179412735 |
N2B | 22141 | 66646;66647;66648 | chr2:178548010;178548009;178548008 | chr2:179412737;179412736;179412735 |
Novex-1 | 22266 | 67021;67022;67023 | chr2:178548010;178548009;178548008 | chr2:179412737;179412736;179412735 |
Novex-2 | 22333 | 67222;67223;67224 | chr2:178548010;178548009;178548008 | chr2:179412737;179412736;179412735 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.981 | N | 0.669 | 0.176 | 0.624369413046 | gnomAD-4.0.0 | 6.84218E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99468E-07 | 0 | 0 |
I/L | rs1020011607 | None | 0.39 | N | 0.432 | 0.06 | 0.488266720666 | gnomAD-4.0.0 | 2.05265E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79894E-06 | 0 | 1.65656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.796 | likely_pathogenic | 0.8327 | pathogenic | -3.014 | Highly Destabilizing | 0.825 | D | 0.579 | neutral | None | None | None | None | N |
I/C | 0.8694 | likely_pathogenic | 0.8911 | pathogenic | -2.816 | Highly Destabilizing | 0.999 | D | 0.671 | prob.neutral | None | None | None | None | N |
I/D | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -3.656 | Highly Destabilizing | 0.995 | D | 0.778 | deleterious | None | None | None | None | N |
I/E | 0.9949 | likely_pathogenic | 0.9944 | pathogenic | -3.425 | Highly Destabilizing | 0.985 | D | 0.789 | deleterious | None | None | None | None | N |
I/F | 0.7857 | likely_pathogenic | 0.761 | pathogenic | -1.716 | Destabilizing | 0.981 | D | 0.669 | prob.neutral | N | 0.483042529 | None | None | N |
I/G | 0.9844 | likely_pathogenic | 0.9867 | pathogenic | -3.507 | Highly Destabilizing | 0.985 | D | 0.779 | deleterious | None | None | None | None | N |
I/H | 0.9948 | likely_pathogenic | 0.994 | pathogenic | -2.725 | Highly Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
I/K | 0.9905 | likely_pathogenic | 0.988 | pathogenic | -2.299 | Highly Destabilizing | 0.985 | D | 0.785 | deleterious | None | None | None | None | N |
I/L | 0.3658 | ambiguous | 0.3556 | ambiguous | -1.561 | Destabilizing | 0.39 | N | 0.432 | neutral | N | 0.485740026 | None | None | N |
I/M | 0.3934 | ambiguous | 0.3886 | ambiguous | -1.964 | Destabilizing | 0.981 | D | 0.606 | neutral | N | 0.488513759 | None | None | N |
I/N | 0.9684 | likely_pathogenic | 0.9696 | pathogenic | -2.784 | Highly Destabilizing | 0.994 | D | 0.773 | deleterious | N | 0.484056487 | None | None | N |
I/P | 0.9518 | likely_pathogenic | 0.9534 | pathogenic | -2.033 | Highly Destabilizing | 0.995 | D | 0.778 | deleterious | None | None | None | None | N |
I/Q | 0.9868 | likely_pathogenic | 0.9853 | pathogenic | -2.644 | Highly Destabilizing | 0.995 | D | 0.766 | deleterious | None | None | None | None | N |
I/R | 0.9811 | likely_pathogenic | 0.9772 | pathogenic | -1.982 | Destabilizing | 0.995 | D | 0.767 | deleterious | None | None | None | None | N |
I/S | 0.9153 | likely_pathogenic | 0.9272 | pathogenic | -3.396 | Highly Destabilizing | 0.981 | D | 0.687 | prob.delet. | N | 0.483296019 | None | None | N |
I/T | 0.8527 | likely_pathogenic | 0.8804 | pathogenic | -3.029 | Highly Destabilizing | 0.877 | D | 0.646 | neutral | N | 0.443992191 | None | None | N |
I/V | 0.1072 | likely_benign | 0.1164 | benign | -2.033 | Highly Destabilizing | 0.009 | N | 0.197 | neutral | N | 0.422499411 | None | None | N |
I/W | 0.9941 | likely_pathogenic | 0.9929 | pathogenic | -1.985 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | None | None | None | None | N |
I/Y | 0.9856 | likely_pathogenic | 0.9825 | pathogenic | -1.868 | Destabilizing | 0.995 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.