Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31218 | 93877;93878;93879 | chr2:178547974;178547973;178547972 | chr2:179412701;179412700;179412699 |
N2AB | 29577 | 88954;88955;88956 | chr2:178547974;178547973;178547972 | chr2:179412701;179412700;179412699 |
N2A | 28650 | 86173;86174;86175 | chr2:178547974;178547973;178547972 | chr2:179412701;179412700;179412699 |
N2B | 22153 | 66682;66683;66684 | chr2:178547974;178547973;178547972 | chr2:179412701;179412700;179412699 |
Novex-1 | 22278 | 67057;67058;67059 | chr2:178547974;178547973;178547972 | chr2:179412701;179412700;179412699 |
Novex-2 | 22345 | 67258;67259;67260 | chr2:178547974;178547973;178547972 | chr2:179412701;179412700;179412699 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.041 | N | 0.189 | 0.225 | 0.139678290688 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0702 | likely_benign | 0.0699 | benign | -0.334 | Destabilizing | 0.041 | N | 0.189 | neutral | N | 0.428582808 | None | None | N |
T/C | 0.3097 | likely_benign | 0.2942 | benign | -0.806 | Destabilizing | 0.944 | D | 0.314 | neutral | None | None | None | None | N |
T/D | 0.2876 | likely_benign | 0.2952 | benign | -0.377 | Destabilizing | 0.388 | N | 0.35 | neutral | None | None | None | None | N |
T/E | 0.2296 | likely_benign | 0.2294 | benign | -0.458 | Destabilizing | 0.241 | N | 0.347 | neutral | None | None | None | None | N |
T/F | 0.2632 | likely_benign | 0.2725 | benign | -1.011 | Destabilizing | 0.818 | D | 0.347 | neutral | None | None | None | None | N |
T/G | 0.1562 | likely_benign | 0.1543 | benign | -0.332 | Destabilizing | 0.116 | N | 0.297 | neutral | None | None | None | None | N |
T/H | 0.1831 | likely_benign | 0.187 | benign | -0.338 | Destabilizing | 0.818 | D | 0.322 | neutral | None | None | None | None | N |
T/I | 0.2006 | likely_benign | 0.2096 | benign | -0.435 | Destabilizing | 0.324 | N | 0.354 | neutral | N | 0.429622958 | None | None | N |
T/K | 0.1525 | likely_benign | 0.1501 | benign | -0.617 | Destabilizing | 0.241 | N | 0.345 | neutral | None | None | None | None | N |
T/L | 0.1007 | likely_benign | 0.1039 | benign | -0.435 | Destabilizing | 0.388 | N | 0.347 | neutral | None | None | None | None | N |
T/M | 0.0972 | likely_benign | 0.101 | benign | -0.566 | Destabilizing | 0.932 | D | 0.311 | neutral | None | None | None | None | N |
T/N | 0.1035 | likely_benign | 0.1046 | benign | -0.523 | Destabilizing | 0.193 | N | 0.301 | neutral | N | 0.429102883 | None | None | N |
T/P | 0.2817 | likely_benign | 0.3296 | benign | -0.386 | Destabilizing | 0.492 | N | 0.341 | neutral | N | 0.4294496 | None | None | N |
T/Q | 0.1617 | likely_benign | 0.1668 | benign | -0.65 | Destabilizing | 0.69 | D | 0.33 | neutral | None | None | None | None | N |
T/R | 0.1225 | likely_benign | 0.1185 | benign | -0.343 | Destabilizing | 0.69 | D | 0.349 | neutral | None | None | None | None | N |
T/S | 0.0739 | likely_benign | 0.0696 | benign | -0.668 | Destabilizing | None | N | 0.127 | neutral | N | 0.426849225 | None | None | N |
T/V | 0.1593 | likely_benign | 0.1622 | benign | -0.386 | Destabilizing | 0.388 | N | 0.289 | neutral | None | None | None | None | N |
T/W | 0.4607 | ambiguous | 0.4583 | ambiguous | -1.129 | Destabilizing | 0.981 | D | 0.363 | neutral | None | None | None | None | N |
T/Y | 0.2395 | likely_benign | 0.2277 | benign | -0.844 | Destabilizing | 0.818 | D | 0.329 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.