Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31221 | 93886;93887;93888 | chr2:178547965;178547964;178547963 | chr2:179412692;179412691;179412690 |
N2AB | 29580 | 88963;88964;88965 | chr2:178547965;178547964;178547963 | chr2:179412692;179412691;179412690 |
N2A | 28653 | 86182;86183;86184 | chr2:178547965;178547964;178547963 | chr2:179412692;179412691;179412690 |
N2B | 22156 | 66691;66692;66693 | chr2:178547965;178547964;178547963 | chr2:179412692;179412691;179412690 |
Novex-1 | 22281 | 67066;67067;67068 | chr2:178547965;178547964;178547963 | chr2:179412692;179412691;179412690 |
Novex-2 | 22348 | 67267;67268;67269 | chr2:178547965;178547964;178547963 | chr2:179412692;179412691;179412690 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.939 | N | 0.579 | 0.208 | 0.434716162284 | gnomAD-4.0.0 | 2.05282E-06 | None | None | None | None | N | None | 0 | 2.23754E-05 | None | 0 | 0 | None | 0 | 0 | 1.79903E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0843 | likely_benign | 0.0805 | benign | -0.19 | Destabilizing | 0.76 | D | 0.558 | neutral | N | 0.474024309 | None | None | N |
T/C | 0.4677 | ambiguous | 0.4107 | ambiguous | -0.356 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
T/D | 0.4282 | ambiguous | 0.376 | ambiguous | 0.155 | Stabilizing | 0.06 | N | 0.408 | neutral | None | None | None | None | N |
T/E | 0.3281 | likely_benign | 0.2933 | benign | 0.068 | Stabilizing | 0.91 | D | 0.581 | neutral | None | None | None | None | N |
T/F | 0.3911 | ambiguous | 0.351 | ambiguous | -0.819 | Destabilizing | 0.998 | D | 0.668 | neutral | None | None | None | None | N |
T/G | 0.2132 | likely_benign | 0.1887 | benign | -0.268 | Destabilizing | 0.91 | D | 0.567 | neutral | None | None | None | None | N |
T/H | 0.2623 | likely_benign | 0.2278 | benign | -0.516 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
T/I | 0.2707 | likely_benign | 0.2573 | benign | -0.11 | Destabilizing | 0.991 | D | 0.676 | prob.neutral | N | 0.445781702 | None | None | N |
T/K | 0.2042 | likely_benign | 0.1774 | benign | -0.29 | Destabilizing | 0.986 | D | 0.642 | neutral | None | None | None | None | N |
T/L | 0.1512 | likely_benign | 0.1524 | benign | -0.11 | Destabilizing | 0.953 | D | 0.606 | neutral | None | None | None | None | N |
T/M | 0.1353 | likely_benign | 0.1352 | benign | -0.113 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
T/N | 0.1382 | likely_benign | 0.1231 | benign | -0.139 | Destabilizing | 0.939 | D | 0.579 | neutral | N | 0.493572862 | None | None | N |
T/P | 0.0751 | likely_benign | 0.079 | benign | -0.111 | Destabilizing | 0.991 | D | 0.668 | neutral | N | 0.445088269 | None | None | N |
T/Q | 0.2053 | likely_benign | 0.1899 | benign | -0.327 | Destabilizing | 0.993 | D | 0.677 | prob.neutral | None | None | None | None | N |
T/R | 0.1822 | likely_benign | 0.1632 | benign | -0.053 | Destabilizing | 0.986 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/S | 0.104 | likely_benign | 0.0894 | benign | -0.298 | Destabilizing | 0.17 | N | 0.417 | neutral | N | 0.474197668 | None | None | N |
T/V | 0.197 | likely_benign | 0.1872 | benign | -0.111 | Destabilizing | 0.953 | D | 0.585 | neutral | None | None | None | None | N |
T/W | 0.6153 | likely_pathogenic | 0.5822 | pathogenic | -0.897 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
T/Y | 0.3457 | ambiguous | 0.303 | benign | -0.575 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.