Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31224 | 93895;93896;93897 | chr2:178547956;178547955;178547954 | chr2:179412683;179412682;179412681 |
N2AB | 29583 | 88972;88973;88974 | chr2:178547956;178547955;178547954 | chr2:179412683;179412682;179412681 |
N2A | 28656 | 86191;86192;86193 | chr2:178547956;178547955;178547954 | chr2:179412683;179412682;179412681 |
N2B | 22159 | 66700;66701;66702 | chr2:178547956;178547955;178547954 | chr2:179412683;179412682;179412681 |
Novex-1 | 22284 | 67075;67076;67077 | chr2:178547956;178547955;178547954 | chr2:179412683;179412682;179412681 |
Novex-2 | 22351 | 67276;67277;67278 | chr2:178547956;178547955;178547954 | chr2:179412683;179412682;179412681 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.879 | N | 0.581 | 0.297 | 0.68047775509 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3085 | likely_benign | 0.258 | benign | -1.59 | Destabilizing | 0.404 | N | 0.443 | neutral | None | None | None | None | I |
L/C | 0.4677 | ambiguous | 0.4025 | ambiguous | -0.978 | Destabilizing | 0.991 | D | 0.509 | neutral | None | None | None | None | I |
L/D | 0.7073 | likely_pathogenic | 0.651 | pathogenic | -1.053 | Destabilizing | 0.826 | D | 0.571 | neutral | None | None | None | None | I |
L/E | 0.3098 | likely_benign | 0.291 | benign | -1.057 | Destabilizing | 0.826 | D | 0.54 | neutral | None | None | None | None | I |
L/F | 0.1939 | likely_benign | 0.1519 | benign | -1.144 | Destabilizing | 0.782 | D | 0.427 | neutral | N | 0.465019958 | None | None | I |
L/G | 0.6339 | likely_pathogenic | 0.5705 | pathogenic | -1.906 | Destabilizing | 0.826 | D | 0.532 | neutral | None | None | None | None | I |
L/H | 0.2234 | likely_benign | 0.1808 | benign | -1.215 | Destabilizing | 0.017 | N | 0.399 | neutral | N | 0.494649432 | None | None | I |
L/I | 0.0889 | likely_benign | 0.0818 | benign | -0.799 | Destabilizing | 0.007 | N | 0.245 | neutral | N | 0.451109298 | None | None | I |
L/K | 0.2146 | likely_benign | 0.1948 | benign | -1.139 | Destabilizing | 0.826 | D | 0.505 | neutral | None | None | None | None | I |
L/M | 0.1029 | likely_benign | 0.0906 | benign | -0.597 | Destabilizing | 0.826 | D | 0.452 | neutral | None | None | None | None | I |
L/N | 0.3611 | ambiguous | 0.2963 | benign | -0.943 | Destabilizing | 0.826 | D | 0.566 | neutral | None | None | None | None | I |
L/P | 0.8859 | likely_pathogenic | 0.8889 | pathogenic | -1.03 | Destabilizing | 0.879 | D | 0.581 | neutral | N | 0.428616441 | None | None | I |
L/Q | 0.1235 | likely_benign | 0.1175 | benign | -1.119 | Destabilizing | 0.826 | D | 0.547 | neutral | None | None | None | None | I |
L/R | 0.1783 | likely_benign | 0.1631 | benign | -0.572 | Destabilizing | 0.782 | D | 0.544 | neutral | N | 0.42507749 | None | None | I |
L/S | 0.3631 | ambiguous | 0.2908 | benign | -1.538 | Destabilizing | 0.404 | N | 0.488 | neutral | None | None | None | None | I |
L/T | 0.172 | likely_benign | 0.1503 | benign | -1.428 | Destabilizing | 0.018 | N | 0.248 | neutral | None | None | None | None | I |
L/V | 0.0853 | likely_benign | 0.0805 | benign | -1.03 | Destabilizing | 0.068 | N | 0.475 | neutral | N | 0.427059003 | None | None | I |
L/W | 0.3221 | likely_benign | 0.2858 | benign | -1.236 | Destabilizing | 0.991 | D | 0.618 | neutral | None | None | None | None | I |
L/Y | 0.3559 | ambiguous | 0.2919 | benign | -1.006 | Destabilizing | 0.826 | D | 0.484 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.