Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31231 | 93916;93917;93918 | chr2:178547935;178547934;178547933 | chr2:179412662;179412661;179412660 |
N2AB | 29590 | 88993;88994;88995 | chr2:178547935;178547934;178547933 | chr2:179412662;179412661;179412660 |
N2A | 28663 | 86212;86213;86214 | chr2:178547935;178547934;178547933 | chr2:179412662;179412661;179412660 |
N2B | 22166 | 66721;66722;66723 | chr2:178547935;178547934;178547933 | chr2:179412662;179412661;179412660 |
Novex-1 | 22291 | 67096;67097;67098 | chr2:178547935;178547934;178547933 | chr2:179412662;179412661;179412660 |
Novex-2 | 22358 | 67297;67298;67299 | chr2:178547935;178547934;178547933 | chr2:179412662;179412661;179412660 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1060500565 | None | 0.001 | N | 0.184 | 0.068 | 0.0482279557977 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0948 | likely_benign | 0.0993 | benign | -0.515 | Destabilizing | 0.004 | N | 0.191 | neutral | None | None | None | None | N |
S/C | 0.1119 | likely_benign | 0.1055 | benign | -0.256 | Destabilizing | 0.928 | D | 0.369 | neutral | N | 0.511891185 | None | None | N |
S/D | 0.3389 | likely_benign | 0.3077 | benign | -0.2 | Destabilizing | 0.241 | N | 0.381 | neutral | None | None | None | None | N |
S/E | 0.4297 | ambiguous | 0.4131 | ambiguous | -0.286 | Destabilizing | 0.388 | N | 0.391 | neutral | None | None | None | None | N |
S/F | 0.1835 | likely_benign | 0.1855 | benign | -1.099 | Destabilizing | 0.818 | D | 0.446 | neutral | None | None | None | None | N |
S/G | 0.1002 | likely_benign | 0.0926 | benign | -0.64 | Destabilizing | 0.09 | N | 0.388 | neutral | N | 0.466713469 | None | None | N |
S/H | 0.2686 | likely_benign | 0.2467 | benign | -1.235 | Destabilizing | 0.818 | D | 0.367 | neutral | None | None | None | None | N |
S/I | 0.1397 | likely_benign | 0.1368 | benign | -0.307 | Destabilizing | 0.457 | N | 0.401 | neutral | N | 0.501116831 | None | None | N |
S/K | 0.5346 | ambiguous | 0.482 | ambiguous | -0.535 | Destabilizing | 0.388 | N | 0.384 | neutral | None | None | None | None | N |
S/L | 0.0854 | likely_benign | 0.0877 | benign | -0.307 | Destabilizing | 0.241 | N | 0.389 | neutral | None | None | None | None | N |
S/M | 0.1447 | likely_benign | 0.1461 | benign | 0.183 | Stabilizing | 0.818 | D | 0.367 | neutral | None | None | None | None | N |
S/N | 0.1016 | likely_benign | 0.0949 | benign | -0.296 | Destabilizing | 0.001 | N | 0.184 | neutral | N | 0.41901831 | None | None | N |
S/P | 0.841 | likely_pathogenic | 0.8419 | pathogenic | -0.348 | Destabilizing | 0.818 | D | 0.334 | neutral | None | None | None | None | N |
S/Q | 0.3724 | ambiguous | 0.346 | ambiguous | -0.624 | Destabilizing | 0.818 | D | 0.395 | neutral | None | None | None | None | N |
S/R | 0.5274 | ambiguous | 0.4822 | ambiguous | -0.29 | Destabilizing | 0.627 | D | 0.337 | neutral | N | 0.48149092 | None | None | N |
S/T | 0.0772 | likely_benign | 0.0799 | benign | -0.387 | Destabilizing | 0.001 | N | 0.218 | neutral | N | 0.437950787 | None | None | N |
S/V | 0.1446 | likely_benign | 0.1454 | benign | -0.348 | Destabilizing | 0.241 | N | 0.375 | neutral | None | None | None | None | N |
S/W | 0.3768 | ambiguous | 0.3639 | ambiguous | -1.066 | Destabilizing | 0.981 | D | 0.56 | neutral | None | None | None | None | N |
S/Y | 0.1665 | likely_benign | 0.1555 | benign | -0.799 | Destabilizing | 0.818 | D | 0.446 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.