Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31234 | 93925;93926;93927 | chr2:178547926;178547925;178547924 | chr2:179412653;179412652;179412651 |
N2AB | 29593 | 89002;89003;89004 | chr2:178547926;178547925;178547924 | chr2:179412653;179412652;179412651 |
N2A | 28666 | 86221;86222;86223 | chr2:178547926;178547925;178547924 | chr2:179412653;179412652;179412651 |
N2B | 22169 | 66730;66731;66732 | chr2:178547926;178547925;178547924 | chr2:179412653;179412652;179412651 |
Novex-1 | 22294 | 67105;67106;67107 | chr2:178547926;178547925;178547924 | chr2:179412653;179412652;179412651 |
Novex-2 | 22361 | 67306;67307;67308 | chr2:178547926;178547925;178547924 | chr2:179412653;179412652;179412651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs548911604 | None | 0.997 | N | 0.719 | 0.396 | 0.351614576976 | gnomAD-4.0.0 | 4.10517E-06 | None | None | None | None | N | None | 1.49379E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65651E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0797 | likely_benign | 0.0811 | benign | -0.887 | Destabilizing | 0.37 | N | 0.279 | neutral | N | 0.487534245 | None | None | N |
T/C | 0.2699 | likely_benign | 0.2878 | benign | -0.507 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
T/D | 0.4119 | ambiguous | 0.4181 | ambiguous | 0.191 | Stabilizing | 0.995 | D | 0.669 | neutral | None | None | None | None | N |
T/E | 0.2886 | likely_benign | 0.2824 | benign | 0.256 | Stabilizing | 0.995 | D | 0.635 | neutral | None | None | None | None | N |
T/F | 0.2279 | likely_benign | 0.2263 | benign | -0.946 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
T/G | 0.2543 | likely_benign | 0.2691 | benign | -1.186 | Destabilizing | 0.967 | D | 0.556 | neutral | None | None | None | None | N |
T/H | 0.1763 | likely_benign | 0.1761 | benign | -1.298 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/I | 0.1177 | likely_benign | 0.1162 | benign | -0.167 | Destabilizing | 0.997 | D | 0.719 | prob.delet. | N | 0.49447886 | None | None | N |
T/K | 0.174 | likely_benign | 0.1594 | benign | -0.353 | Destabilizing | 0.995 | D | 0.663 | neutral | None | None | None | None | N |
T/L | 0.0945 | likely_benign | 0.0919 | benign | -0.167 | Destabilizing | 0.983 | D | 0.536 | neutral | None | None | None | None | N |
T/M | 0.0919 | likely_benign | 0.0921 | benign | -0.106 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
T/N | 0.1272 | likely_benign | 0.13 | benign | -0.536 | Destabilizing | 0.994 | D | 0.586 | neutral | N | 0.450362724 | None | None | N |
T/P | 0.3935 | ambiguous | 0.3583 | ambiguous | -0.374 | Destabilizing | 0.997 | D | 0.726 | prob.delet. | N | 0.471851494 | None | None | N |
T/Q | 0.1758 | likely_benign | 0.1768 | benign | -0.516 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/R | 0.1357 | likely_benign | 0.1232 | benign | -0.295 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/S | 0.0959 | likely_benign | 0.0988 | benign | -0.909 | Destabilizing | 0.63 | D | 0.352 | neutral | N | 0.446610343 | None | None | N |
T/V | 0.0941 | likely_benign | 0.0932 | benign | -0.374 | Destabilizing | 0.983 | D | 0.467 | neutral | None | None | None | None | N |
T/W | 0.5467 | ambiguous | 0.5534 | ambiguous | -0.912 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/Y | 0.2444 | likely_benign | 0.235 | benign | -0.619 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.