Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31239 | 93940;93941;93942 | chr2:178547911;178547910;178547909 | chr2:179412638;179412637;179412636 |
N2AB | 29598 | 89017;89018;89019 | chr2:178547911;178547910;178547909 | chr2:179412638;179412637;179412636 |
N2A | 28671 | 86236;86237;86238 | chr2:178547911;178547910;178547909 | chr2:179412638;179412637;179412636 |
N2B | 22174 | 66745;66746;66747 | chr2:178547911;178547910;178547909 | chr2:179412638;179412637;179412636 |
Novex-1 | 22299 | 67120;67121;67122 | chr2:178547911;178547910;178547909 | chr2:179412638;179412637;179412636 |
Novex-2 | 22366 | 67321;67322;67323 | chr2:178547911;178547910;178547909 | chr2:179412638;179412637;179412636 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.999 | D | 0.833 | 0.685 | 0.819228050113 | gnomAD-4.0.0 | 1.36838E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79887E-06 | 0 | 0 |
I/V | None | None | 0.941 | N | 0.457 | 0.163 | 0.400468435593 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8336 | likely_pathogenic | 0.8802 | pathogenic | -2.049 | Highly Destabilizing | 0.996 | D | 0.69 | prob.neutral | None | None | None | None | I |
I/C | 0.8583 | likely_pathogenic | 0.888 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
I/D | 0.996 | likely_pathogenic | 0.9974 | pathogenic | -1.269 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
I/E | 0.9889 | likely_pathogenic | 0.992 | pathogenic | -1.194 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
I/F | 0.2559 | likely_benign | 0.2686 | benign | -1.355 | Destabilizing | 0.978 | D | 0.661 | neutral | N | 0.489311554 | None | None | I |
I/G | 0.9722 | likely_pathogenic | 0.9833 | pathogenic | -2.458 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
I/H | 0.9535 | likely_pathogenic | 0.9656 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
I/K | 0.9637 | likely_pathogenic | 0.9726 | pathogenic | -1.471 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | I |
I/L | 0.1866 | likely_benign | 0.2082 | benign | -0.957 | Destabilizing | 0.973 | D | 0.445 | neutral | D | 0.52884859 | None | None | I |
I/M | 0.2467 | likely_benign | 0.2654 | benign | -0.815 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.50036136 | None | None | I |
I/N | 0.9535 | likely_pathogenic | 0.9689 | pathogenic | -1.405 | Destabilizing | 0.999 | D | 0.833 | deleterious | D | 0.52358095 | None | None | I |
I/P | 0.9871 | likely_pathogenic | 0.9902 | pathogenic | -1.291 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
I/Q | 0.9666 | likely_pathogenic | 0.9755 | pathogenic | -1.467 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
I/R | 0.9398 | likely_pathogenic | 0.9531 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
I/S | 0.9004 | likely_pathogenic | 0.9341 | pathogenic | -2.151 | Highly Destabilizing | 0.998 | D | 0.799 | deleterious | N | 0.50061485 | None | None | I |
I/T | 0.8416 | likely_pathogenic | 0.8903 | pathogenic | -1.935 | Destabilizing | 0.998 | D | 0.771 | deleterious | N | 0.503702268 | None | None | I |
I/V | 0.075 | likely_benign | 0.0793 | benign | -1.291 | Destabilizing | 0.941 | D | 0.457 | neutral | N | 0.450491302 | None | None | I |
I/W | 0.9362 | likely_pathogenic | 0.9481 | pathogenic | -1.448 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
I/Y | 0.7182 | likely_pathogenic | 0.76 | pathogenic | -1.232 | Destabilizing | 0.611 | D | 0.469 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.