Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3124293949;93950;93951 chr2:178547902;178547901;178547900chr2:179412629;179412628;179412627
N2AB2960189026;89027;89028 chr2:178547902;178547901;178547900chr2:179412629;179412628;179412627
N2A2867486245;86246;86247 chr2:178547902;178547901;178547900chr2:179412629;179412628;179412627
N2B2217766754;66755;66756 chr2:178547902;178547901;178547900chr2:179412629;179412628;179412627
Novex-12230267129;67130;67131 chr2:178547902;178547901;178547900chr2:179412629;179412628;179412627
Novex-22236967330;67331;67332 chr2:178547902;178547901;178547900chr2:179412629;179412628;179412627
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Ig-151
  • Domain position: 25
  • Structural Position: 41
  • Q(SASA): 0.6955
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs563887822 -0.094 1.0 N 0.761 0.47 0.637288232684 gnomAD-2.1.1 3.21E-05 None None None None I None 4.13E-05 0 None 0 0 None 3.27E-05 None 0 5.47E-05 0
R/C rs563887822 -0.094 1.0 N 0.761 0.47 0.637288232684 gnomAD-3.1.2 4.6E-05 None None None None I None 2.41E-05 0 0 0 1.92678E-04 None 0 0 5.88E-05 2.07125E-04 0
R/C rs563887822 -0.094 1.0 N 0.761 0.47 0.637288232684 1000 genomes 1.99681E-04 None None None None I None 0 0 None None 0 0 None None None 1E-03 None
R/C rs563887822 -0.094 1.0 N 0.761 0.47 0.637288232684 gnomAD-4.0.0 4.2756E-05 None None None None I None 1.33273E-05 0 None 0 2.22955E-05 None 0 0 5.00071E-05 4.39252E-05 6.40205E-05
R/H rs369899675 -0.805 1.0 D 0.765 0.434 None gnomAD-2.1.1 9.64E-05 None None None None I None 4.13E-05 2.83E-05 None 0 1.18009E-03 None 0 None 0 1.56E-05 0
R/H rs369899675 -0.805 1.0 D 0.765 0.434 None gnomAD-3.1.2 6.58E-05 None None None None I None 4.83E-05 6.56E-05 0 0 5.78481E-04 None 0 0 2.94E-05 0 9.56938E-04
R/H rs369899675 -0.805 1.0 D 0.765 0.434 None gnomAD-4.0.0 4.4E-05 None None None None I None 5.34245E-05 3.33567E-05 None 0 5.79555E-04 None 0 3.28947E-04 2.8818E-05 0 4.80323E-05
R/L rs369899675 None 1.0 N 0.639 0.463 0.598660209896 gnomAD-4.0.0 6.84195E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99437E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.8692 likely_pathogenic 0.8361 pathogenic -0.014 Destabilizing 0.999 D 0.655 neutral None None None None I
R/C 0.3033 likely_benign 0.2539 benign -0.301 Destabilizing 1.0 D 0.761 deleterious N 0.505304749 None None I
R/D 0.9687 likely_pathogenic 0.9646 pathogenic -0.346 Destabilizing 1.0 D 0.714 prob.delet. None None None None I
R/E 0.8062 likely_pathogenic 0.7734 pathogenic -0.317 Destabilizing 0.999 D 0.705 prob.neutral None None None None I
R/F 0.7775 likely_pathogenic 0.7349 pathogenic -0.364 Destabilizing 1.0 D 0.729 prob.delet. None None None None I
R/G 0.8303 likely_pathogenic 0.8017 pathogenic -0.13 Destabilizing 1.0 D 0.639 neutral N 0.505051259 None None I
R/H 0.1898 likely_benign 0.1791 benign -0.608 Destabilizing 1.0 D 0.765 deleterious D 0.525016064 None None I
R/I 0.4677 ambiguous 0.3888 ambiguous 0.245 Stabilizing 1.0 D 0.727 prob.delet. None None None None I
R/K 0.1934 likely_benign 0.1941 benign -0.238 Destabilizing 0.998 D 0.522 neutral None None None None I
R/L 0.5154 ambiguous 0.4439 ambiguous 0.245 Stabilizing 1.0 D 0.639 neutral N 0.508238457 None None I
R/M 0.613 likely_pathogenic 0.5235 ambiguous -0.142 Destabilizing 1.0 D 0.734 prob.delet. None None None None I
R/N 0.9048 likely_pathogenic 0.8911 pathogenic -0.152 Destabilizing 1.0 D 0.739 prob.delet. None None None None I
R/P 0.9863 likely_pathogenic 0.9842 pathogenic 0.175 Stabilizing 1.0 D 0.712 prob.delet. N 0.493948443 None None I
R/Q 0.1931 likely_benign 0.1742 benign -0.184 Destabilizing 1.0 D 0.724 prob.delet. None None None None I
R/S 0.8757 likely_pathogenic 0.8604 pathogenic -0.308 Destabilizing 1.0 D 0.675 prob.neutral N 0.478203552 None None I
R/T 0.7344 likely_pathogenic 0.6697 pathogenic -0.185 Destabilizing 1.0 D 0.67 neutral None None None None I
R/V 0.6411 likely_pathogenic 0.5844 pathogenic 0.175 Stabilizing 1.0 D 0.701 prob.neutral None None None None I
R/W 0.3146 likely_benign 0.2576 benign -0.569 Destabilizing 1.0 D 0.766 deleterious None None None None I
R/Y 0.5712 likely_pathogenic 0.5214 ambiguous -0.175 Destabilizing 1.0 D 0.74 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.