Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31251 | 93976;93977;93978 | chr2:178547875;178547874;178547873 | chr2:179412602;179412601;179412600 |
N2AB | 29610 | 89053;89054;89055 | chr2:178547875;178547874;178547873 | chr2:179412602;179412601;179412600 |
N2A | 28683 | 86272;86273;86274 | chr2:178547875;178547874;178547873 | chr2:179412602;179412601;179412600 |
N2B | 22186 | 66781;66782;66783 | chr2:178547875;178547874;178547873 | chr2:179412602;179412601;179412600 |
Novex-1 | 22311 | 67156;67157;67158 | chr2:178547875;178547874;178547873 | chr2:179412602;179412601;179412600 |
Novex-2 | 22378 | 67357;67358;67359 | chr2:178547875;178547874;178547873 | chr2:179412602;179412601;179412600 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.835 | 0.435 | 0.520002024791 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4339 | ambiguous | 0.4917 | ambiguous | -2.187 | Highly Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
L/C | 0.6343 | likely_pathogenic | 0.6622 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/D | 0.9089 | likely_pathogenic | 0.9309 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/E | 0.6196 | likely_pathogenic | 0.667 | pathogenic | -1.715 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
L/F | 0.2392 | likely_benign | 0.2461 | benign | -1.405 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
L/G | 0.7906 | likely_pathogenic | 0.8318 | pathogenic | -2.648 | Highly Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/H | 0.308 | likely_benign | 0.3313 | benign | -1.985 | Destabilizing | 0.844 | D | 0.54 | neutral | None | None | None | None | N |
L/I | 0.1557 | likely_benign | 0.1662 | benign | -0.909 | Destabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | N |
L/K | 0.2354 | likely_benign | 0.2497 | benign | -1.457 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/M | 0.1243 | likely_benign | 0.1354 | benign | -0.715 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.496036298 | None | None | N |
L/N | 0.6468 | likely_pathogenic | 0.698 | pathogenic | -1.517 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
L/P | 0.9292 | likely_pathogenic | 0.962 | pathogenic | -1.31 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.458681082 | None | None | N |
L/Q | 0.2102 | likely_benign | 0.2403 | benign | -1.52 | Destabilizing | 0.999 | D | 0.815 | deleterious | N | 0.457920613 | None | None | N |
L/R | 0.1982 | likely_benign | 0.2053 | benign | -1.06 | Destabilizing | 0.999 | D | 0.801 | deleterious | N | 0.397485457 | None | None | N |
L/S | 0.5915 | likely_pathogenic | 0.6472 | pathogenic | -2.256 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/T | 0.4143 | ambiguous | 0.4749 | ambiguous | -1.991 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/V | 0.1618 | likely_benign | 0.1776 | benign | -1.31 | Destabilizing | 0.999 | D | 0.459 | neutral | N | 0.468945698 | None | None | N |
L/W | 0.2731 | likely_benign | 0.3063 | benign | -1.67 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
L/Y | 0.4074 | ambiguous | 0.4113 | ambiguous | -1.385 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.