Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31261 | 94006;94007;94008 | chr2:178547845;178547844;178547843 | chr2:179412572;179412571;179412570 |
N2AB | 29620 | 89083;89084;89085 | chr2:178547845;178547844;178547843 | chr2:179412572;179412571;179412570 |
N2A | 28693 | 86302;86303;86304 | chr2:178547845;178547844;178547843 | chr2:179412572;179412571;179412570 |
N2B | 22196 | 66811;66812;66813 | chr2:178547845;178547844;178547843 | chr2:179412572;179412571;179412570 |
Novex-1 | 22321 | 67186;67187;67188 | chr2:178547845;178547844;178547843 | chr2:179412572;179412571;179412570 |
Novex-2 | 22388 | 67387;67388;67389 | chr2:178547845;178547844;178547843 | chr2:179412572;179412571;179412570 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/Q | rs755974993 | -0.4 | 1.0 | N | 0.667 | 0.371 | 0.246773566709 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
R/Q | rs755974993 | -0.4 | 1.0 | N | 0.667 | 0.371 | 0.246773566709 | gnomAD-4.0.0 | 4.78932E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39657E-06 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8601 | likely_pathogenic | 0.9328 | pathogenic | -0.634 | Destabilizing | 0.999 | D | 0.534 | neutral | None | None | None | None | N |
R/C | 0.5578 | ambiguous | 0.6833 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
R/D | 0.9211 | likely_pathogenic | 0.9534 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
R/E | 0.7716 | likely_pathogenic | 0.8549 | pathogenic | 0.088 | Stabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | N |
R/F | 0.9235 | likely_pathogenic | 0.9593 | pathogenic | -0.498 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
R/G | 0.7951 | likely_pathogenic | 0.8892 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.472980811 | None | None | N |
R/H | 0.2629 | likely_benign | 0.3393 | benign | -1.321 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
R/I | 0.7587 | likely_pathogenic | 0.8574 | pathogenic | 0.201 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
R/K | 0.3557 | ambiguous | 0.4248 | ambiguous | -0.688 | Destabilizing | 0.998 | D | 0.445 | neutral | None | None | None | None | N |
R/L | 0.7087 | likely_pathogenic | 0.826 | pathogenic | 0.201 | Stabilizing | 1.0 | D | 0.659 | neutral | N | 0.496364985 | None | None | N |
R/M | 0.7709 | likely_pathogenic | 0.8722 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
R/N | 0.8932 | likely_pathogenic | 0.9318 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
R/P | 0.9547 | likely_pathogenic | 0.9782 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.497125453 | None | None | N |
R/Q | 0.3105 | likely_benign | 0.3744 | ambiguous | -0.29 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.481730223 | None | None | N |
R/S | 0.899 | likely_pathogenic | 0.9481 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
R/T | 0.7083 | likely_pathogenic | 0.8235 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
R/V | 0.8511 | likely_pathogenic | 0.9196 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
R/W | 0.4977 | ambiguous | 0.6235 | pathogenic | -0.203 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
R/Y | 0.8081 | likely_pathogenic | 0.8791 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.