Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31264 | 94015;94016;94017 | chr2:178547836;178547835;178547834 | chr2:179412563;179412562;179412561 |
N2AB | 29623 | 89092;89093;89094 | chr2:178547836;178547835;178547834 | chr2:179412563;179412562;179412561 |
N2A | 28696 | 86311;86312;86313 | chr2:178547836;178547835;178547834 | chr2:179412563;179412562;179412561 |
N2B | 22199 | 66820;66821;66822 | chr2:178547836;178547835;178547834 | chr2:179412563;179412562;179412561 |
Novex-1 | 22324 | 67195;67196;67197 | chr2:178547836;178547835;178547834 | chr2:179412563;179412562;179412561 |
Novex-2 | 22391 | 67396;67397;67398 | chr2:178547836;178547835;178547834 | chr2:179412563;179412562;179412561 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs773835374 | -1.843 | 1.0 | N | 0.706 | 0.59 | 0.793015639883 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs773835374 | -1.843 | 1.0 | N | 0.706 | 0.59 | 0.793015639883 | gnomAD-4.0.0 | 3.18218E-06 | None | None | None | None | N | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 2.85783E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6197 | likely_pathogenic | 0.694 | pathogenic | -2.049 | Highly Destabilizing | 0.999 | D | 0.502 | neutral | None | None | None | None | N |
I/C | 0.7241 | likely_pathogenic | 0.7767 | pathogenic | -1.664 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
I/D | 0.959 | likely_pathogenic | 0.9697 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
I/E | 0.8831 | likely_pathogenic | 0.9079 | pathogenic | -1.145 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
I/F | 0.2052 | likely_benign | 0.2041 | benign | -1.502 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.490318047 | None | None | N |
I/G | 0.8861 | likely_pathogenic | 0.917 | pathogenic | -2.442 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
I/H | 0.7849 | likely_pathogenic | 0.8191 | pathogenic | -1.652 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
I/K | 0.735 | likely_pathogenic | 0.7677 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
I/L | 0.1557 | likely_benign | 0.1751 | benign | -1.005 | Destabilizing | 0.993 | D | 0.327 | neutral | N | 0.520148962 | None | None | N |
I/M | 0.1425 | likely_benign | 0.1504 | benign | -0.951 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.487493663 | None | None | N |
I/N | 0.7208 | likely_pathogenic | 0.7629 | pathogenic | -1.245 | Destabilizing | 1.0 | D | 0.814 | deleterious | N | 0.514969668 | None | None | N |
I/P | 0.9582 | likely_pathogenic | 0.9679 | pathogenic | -1.325 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
I/Q | 0.7627 | likely_pathogenic | 0.8059 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
I/R | 0.647 | likely_pathogenic | 0.6829 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
I/S | 0.6552 | likely_pathogenic | 0.7143 | pathogenic | -2.033 | Highly Destabilizing | 1.0 | D | 0.748 | deleterious | N | 0.499067459 | None | None | N |
I/T | 0.5783 | likely_pathogenic | 0.6245 | pathogenic | -1.827 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.519362315 | None | None | N |
I/V | 0.0845 | likely_benign | 0.0925 | benign | -1.325 | Destabilizing | 0.993 | D | 0.315 | neutral | N | 0.475816608 | None | None | N |
I/W | 0.8076 | likely_pathogenic | 0.8296 | pathogenic | -1.55 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
I/Y | 0.63 | likely_pathogenic | 0.6468 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.