Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31273 | 94042;94043;94044 | chr2:178547809;178547808;178547807 | chr2:179412536;179412535;179412534 |
N2AB | 29632 | 89119;89120;89121 | chr2:178547809;178547808;178547807 | chr2:179412536;179412535;179412534 |
N2A | 28705 | 86338;86339;86340 | chr2:178547809;178547808;178547807 | chr2:179412536;179412535;179412534 |
N2B | 22208 | 66847;66848;66849 | chr2:178547809;178547808;178547807 | chr2:179412536;179412535;179412534 |
Novex-1 | 22333 | 67222;67223;67224 | chr2:178547809;178547808;178547807 | chr2:179412536;179412535;179412534 |
Novex-2 | 22400 | 67423;67424;67425 | chr2:178547809;178547808;178547807 | chr2:179412536;179412535;179412534 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | None | None | 1.0 | D | 0.854 | 0.695 | 0.86173524933 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
L/V | rs1697833909 | None | 0.999 | N | 0.651 | 0.466 | 0.586144602217 | gnomAD-4.0.0 | 3.18224E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54847E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.89 | likely_pathogenic | 0.9275 | pathogenic | -2.38 | Highly Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/C | 0.837 | likely_pathogenic | 0.8537 | pathogenic | -1.903 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9996 | pathogenic | -2.962 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
L/E | 0.9944 | likely_pathogenic | 0.9965 | pathogenic | -2.622 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/F | 0.3924 | ambiguous | 0.4285 | ambiguous | -1.448 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/G | 0.9837 | likely_pathogenic | 0.9909 | pathogenic | -3.009 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/H | 0.9737 | likely_pathogenic | 0.9819 | pathogenic | -2.972 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/I | 0.1661 | likely_benign | 0.1883 | benign | -0.478 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
L/K | 0.9854 | likely_pathogenic | 0.9897 | pathogenic | -1.724 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/M | 0.2704 | likely_benign | 0.2992 | benign | -0.879 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.537347246 | None | None | N |
L/N | 0.9952 | likely_pathogenic | 0.9971 | pathogenic | -2.471 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/P | 0.9945 | likely_pathogenic | 0.997 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.550224489 | None | None | N |
L/Q | 0.9709 | likely_pathogenic | 0.9806 | pathogenic | -2.022 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.550224489 | None | None | N |
L/R | 0.9651 | likely_pathogenic | 0.9745 | pathogenic | -2.063 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | D | 0.550224489 | None | None | N |
L/S | 0.9882 | likely_pathogenic | 0.9931 | pathogenic | -3.03 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/T | 0.9634 | likely_pathogenic | 0.976 | pathogenic | -2.503 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
L/V | 0.1817 | likely_benign | 0.198 | benign | -1.104 | Destabilizing | 0.999 | D | 0.651 | neutral | N | 0.510595711 | None | None | N |
L/W | 0.8875 | likely_pathogenic | 0.912 | pathogenic | -1.786 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/Y | 0.9022 | likely_pathogenic | 0.9132 | pathogenic | -1.584 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.