Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31279 | 94060;94061;94062 | chr2:178547791;178547790;178547789 | chr2:179412518;179412517;179412516 |
N2AB | 29638 | 89137;89138;89139 | chr2:178547791;178547790;178547789 | chr2:179412518;179412517;179412516 |
N2A | 28711 | 86356;86357;86358 | chr2:178547791;178547790;178547789 | chr2:179412518;179412517;179412516 |
N2B | 22214 | 66865;66866;66867 | chr2:178547791;178547790;178547789 | chr2:179412518;179412517;179412516 |
Novex-1 | 22339 | 67240;67241;67242 | chr2:178547791;178547790;178547789 | chr2:179412518;179412517;179412516 |
Novex-2 | 22406 | 67441;67442;67443 | chr2:178547791;178547790;178547789 | chr2:179412518;179412517;179412516 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs577904312 | 0.417 | 0.969 | N | 0.235 | 0.242 | 0.387850303812 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/I | rs577904312 | 0.417 | 0.969 | N | 0.235 | 0.242 | 0.387850303812 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/I | rs577904312 | 0.417 | 0.969 | N | 0.235 | 0.242 | 0.387850303812 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
M/I | rs577904312 | 0.417 | 0.969 | N | 0.235 | 0.242 | 0.387850303812 | gnomAD-4.0.0 | 6.56625E-06 | None | None | None | None | N | None | 2.40523E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/L | None | None | 0.652 | N | 0.231 | 0.295 | 0.395143324098 | gnomAD-4.0.0 | 6.84173E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51991E-05 | None | 0 | 0 | 0 | 0 | 0 |
M/T | None | None | 0.912 | N | 0.327 | 0.318 | 0.691401027782 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85776E-06 | 0 | 0 |
M/V | rs765117891 | 0.327 | 0.811 | N | 0.305 | 0.272 | 0.369867359543 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/V | rs765117891 | 0.327 | 0.811 | N | 0.305 | 0.272 | 0.369867359543 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
M/V | rs765117891 | 0.327 | 0.811 | N | 0.305 | 0.272 | 0.369867359543 | gnomAD-4.0.0 | 7.43576E-06 | None | None | None | None | N | None | 1.33444E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47565E-06 | 0 | 1.60097E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.2984 | likely_benign | 0.3508 | ambiguous | -0.736 | Destabilizing | 0.737 | D | 0.369 | neutral | None | None | None | None | N |
M/C | 0.5919 | likely_pathogenic | 0.5889 | pathogenic | -0.609 | Destabilizing | 0.998 | D | 0.379 | neutral | None | None | None | None | N |
M/D | 0.7536 | likely_pathogenic | 0.7982 | pathogenic | 0.144 | Stabilizing | 0.932 | D | 0.421 | neutral | None | None | None | None | N |
M/E | 0.3682 | ambiguous | 0.4004 | ambiguous | 0.097 | Stabilizing | 0.737 | D | 0.349 | neutral | None | None | None | None | N |
M/F | 0.3487 | ambiguous | 0.362 | ambiguous | -0.351 | Destabilizing | 0.993 | D | 0.333 | neutral | None | None | None | None | N |
M/G | 0.4569 | ambiguous | 0.5125 | ambiguous | -0.938 | Destabilizing | 0.932 | D | 0.387 | neutral | None | None | None | None | N |
M/H | 0.3689 | ambiguous | 0.3904 | ambiguous | -0.096 | Destabilizing | 0.993 | D | 0.362 | neutral | None | None | None | None | N |
M/I | 0.3413 | ambiguous | 0.3692 | ambiguous | -0.29 | Destabilizing | 0.969 | D | 0.235 | neutral | N | 0.456713559 | None | None | N |
M/K | 0.1152 | likely_benign | 0.1234 | benign | 0.334 | Stabilizing | 0.01 | N | 0.131 | neutral | N | 0.378692706 | None | None | N |
M/L | 0.0951 | likely_benign | 0.1087 | benign | -0.29 | Destabilizing | 0.652 | D | 0.231 | neutral | N | 0.432567263 | None | None | N |
M/N | 0.4025 | ambiguous | 0.4474 | ambiguous | 0.49 | Stabilizing | 0.932 | D | 0.398 | neutral | None | None | None | None | N |
M/P | 0.8882 | likely_pathogenic | 0.9204 | pathogenic | -0.409 | Destabilizing | 0.977 | D | 0.379 | neutral | None | None | None | None | N |
M/Q | 0.1341 | likely_benign | 0.1419 | benign | 0.296 | Stabilizing | 0.872 | D | 0.223 | neutral | None | None | None | None | N |
M/R | 0.1426 | likely_benign | 0.154 | benign | 0.827 | Stabilizing | 0.514 | D | 0.333 | neutral | N | 0.441936108 | None | None | N |
M/S | 0.2669 | likely_benign | 0.2895 | benign | -0.02 | Destabilizing | 0.737 | D | 0.335 | neutral | None | None | None | None | N |
M/T | 0.1707 | likely_benign | 0.1922 | benign | 0.038 | Stabilizing | 0.912 | D | 0.327 | neutral | N | 0.415018865 | None | None | N |
M/V | 0.079 | likely_benign | 0.0866 | benign | -0.409 | Destabilizing | 0.811 | D | 0.305 | neutral | N | 0.415058937 | None | None | N |
M/W | 0.6728 | likely_pathogenic | 0.698 | pathogenic | -0.288 | Destabilizing | 0.998 | D | 0.394 | neutral | None | None | None | None | N |
M/Y | 0.561 | ambiguous | 0.5734 | pathogenic | -0.15 | Destabilizing | 0.993 | D | 0.403 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.